RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 Q8N8P6 123 aa12.75□□□□□ -0.37
GABRB3-215ENST00000622697 TRAV13-1A0A0B4J241 112 aa12.75□□□□□ -0.37
GABRB3-215ENST00000622697 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
GABRB3-215ENST00000622697 GTSF1LQ9H1H1 148 aa12.75□□□□□ -0.37
GABRB3-215ENST00000622697 DYNAPQ8N1N2 210 aa12.74□□□□□ -0.37
GABRB3-215ENST00000622697 LINC01356Q8N9X3 169 aa12.74□□□□□ -0.37
GABRB3-215ENST00000622697 IGKV1OR2-108A0A075B7D4 117 aa12.74□□□□□ -0.37
GABRB3-215ENST00000622697 F6UB75 175 aa12.74□□□□□ -0.37
GABRB3-215ENST00000622697 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-215ENST00000622697 SPRY4Q9C004 299 aa12.74□□□□□ -0.37
GABRB3-215ENST00000622697 COL4A4P53420 1690 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-215ENST00000622697 DKK2Q9UBU2 259 aa12.73□□□□□ -0.37
GABRB3-215ENST00000622697 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
GABRB3-215ENST00000622697 TECTAO75443 2155 aa12.73□□□□□ -0.37
GABRB3-215ENST00000622697 SLC25A16P16260 332 aa12.73□□□□□ -0.37
GABRB3-215ENST00000622697 MRPL35Q9NZE8 188 aaKnown RBP12.73□□□□□ -0.37
GABRB3-215ENST00000622697 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-215ENST00000622697 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 CENPFP49454 3210 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RBMY1BA6NDE4 496 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RBMY1EA6NEQ0 496 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RBMY1DP0C7P1 496 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RBMY1A1P0DJD3 496 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RBMY1CP0DJD4 496 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RPL36AP83881 106 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 UTF1Q5T230 341 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 RPL36ALQ969Q0 106 aaKnown RBP12.72□□□□□ -0.37
GABRB3-215ENST00000622697 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 LINC01549A6NIU2 74 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 COX8AP10176 69 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
GABRB3-215ENST00000622697 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-215ENST00000622697 ODF3L1Q8IXM7 274 aa12.71□□□□□ -0.37
GABRB3-215ENST00000622697 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
GABRB3-215ENST00000622697 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-215ENST00000622697 FOXE3Q13461 319 aa12.71□□□□□ -0.37
GABRB3-215ENST00000622697 SPG11Q96JI7 2443 aa12.71□□□□□ -0.37
GABRB3-215ENST00000622697 TRAV8-4A0A0B4J246 113 aa12.71□□□□□ -0.37
GABRB3-215ENST00000622697 DLX4Q92988 240 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-215ENST00000622697 DPH3Q96FX2 82 aa12.71□□□□□ -0.38
GABRB3-215ENST00000622697 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 GP9P14770 177 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
GABRB3-215ENST00000622697 CFHR4Q92496 578 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 CFHR3Q02985 330 aa12.7□□□□□ -0.38
GABRB3-215ENST00000622697 SDHAF1A6NFY7 115 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 K7ERJ3 54 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 INSP01308 110 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 MUC6Q6W4X9 2439 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 UTRNP46939 3433 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 BVES-AS1Q5T3Y7 98 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
GABRB3-215ENST00000622697 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 I3L2K1 104 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 K7EIM0 57 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 MORN3Q6PF18 240 aaPredicted RBP12.69□□□□□ -0.38
GABRB3-215ENST00000622697 IGF2BP2-AS1Q96M15 143 aa12.69□□□□□ -0.38
GABRB3-215ENST00000622697 NDUFA4O00483 81 aa12.68□□□□□ -0.38
GABRB3-215ENST00000622697 C8orf31Q8N9H6 132 aa12.68□□□□□ -0.38
GABRB3-215ENST00000622697 GNRH2O43555 120 aa12.68□□□□□ -0.38
GABRB3-215ENST00000622697 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
GABRB3-215ENST00000622697 OCIAD2Q56VL3 154 aa12.68□□□□□ -0.38
GABRB3-215ENST00000622697 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-215ENST00000622697 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
GABRB3-215ENST00000622697 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 MSRB1Q9NZV6 116 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 WIPF2Q8TF74 440 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-215ENST00000622697 NDUFS8O00217 210 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 DEFB130BP0DP73 79 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 DEFB130AP0DP74 79 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 C9orf118A6NHY6 69 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 BRWD1-AS2P59051 145 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 LY6G5BQ8NDX9 201 aa12.67□□□□□ -0.38
GABRB3-215ENST00000622697 PAX4O43316 350 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 CKS1BP61024 79 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
GABRB3-215ENST00000622697 PROP1O75360 226 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 TCTEX1D4Q5JR98 221 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 ZNF295-AS1Q8N0V1 137 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 C9JAW5 83 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 ATXN8Q156A1 80 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 KIR2DL5BA0A0G2JN68 375 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 KIR2DL5BA0A0G2JPC4 375 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 KIR2DL5AQ8N109 375 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 MED12LQ86YW9 2145 aa12.66□□□□□ -0.38
GABRB3-215ENST00000622697 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
GABRB3-215ENST00000622697 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms