RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PF4V1P10720 104 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
CNOT3-209ENST00000617930 GAGE1Q13065 139 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 ZFP30Q9Y2G7 519 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.39□□□□□ -0.27
CNOT3-209ENST00000617930 TRAV8-2A0A0B4J237 113 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 HAX1O00165 279 aa13.39□□□□□ -0.27
CNOT3-209ENST00000617930 H3BUA1 57 aa13.38□□□□□ -0.27
CNOT3-209ENST00000617930 RAB9AP51151 201 aa13.38□□□□□ -0.27
CNOT3-209ENST00000617930 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
CNOT3-209ENST00000617930 HOXA3O43365 443 aaPredicted RBP13.37□□□□□ -0.27
CNOT3-209ENST00000617930 CD5LO43866 347 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 LEPROTL1O95214 131 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 TSPOP30536 169 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 SPATA12Q7Z6I5 190 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 Q8TAT8 98 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 USMG5Q96IX5 58 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 METTL26Q96S19 204 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 NDFIP1Q9BT67 221 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 LINC00614P0C842 121 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 ZNF575Q86XF7 245 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 OR4X2Q8NGF9 303 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 MTORP42345 2549 aa13.37□□□□□ -0.27
CNOT3-209ENST00000617930 A0A1B0GUT8 65 aa13.36□□□□□ -0.27
CNOT3-209ENST00000617930 OR4C46A6NHA9 309 aa13.36□□□□□ -0.27
CNOT3-209ENST00000617930 NPSP0C0P6 89 aa13.36□□□□□ -0.27
CNOT3-209ENST00000617930 IGLL1P15814 213 aa13.36□□□□□ -0.27
CNOT3-209ENST00000617930 RIGQ13278 110 aa13.36□□□□□ -0.27
CNOT3-209ENST00000617930 CSN1S1P47710 185 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 ZNF80P51504 273 aaPredicted RBP13.35□□□□□ -0.27
CNOT3-209ENST00000617930 ERCC8Q13216 396 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 STPG4Q8N801 248 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 GLMPQ8WWB7 406 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 PRR25Q96S07 402 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
CNOT3-209ENST00000617930 PSMB8P28062 276 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 GPHB5Q86YW7 130 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 VPREB3Q9UKI3 123 aa13.35□□□□□ -0.27
CNOT3-209ENST00000617930 SYS1-DBNDD2H3BUS1 97 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 ARMS2P0C7Q2 107 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 EDN2P20800 178 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 HINT1P49773 126 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-209ENST00000617930 COX8CQ7Z4L0 72 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 YAE1D1Q9NRH1 226 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 FLNBO75369 2602 aaKnown RBP13.34□□□□□ -0.27
CNOT3-209ENST00000617930 NDUFA4O00483 81 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 LINC00173Q6ZV60 143 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 TPPP3Q9BW30 176 aa13.34□□□□□ -0.27
CNOT3-209ENST00000617930 SERTM2A0A1B0GWG4 89 aa13.33□□□□□ -0.28
CNOT3-209ENST00000617930 CRXO43186 299 aaPredicted RBP13.33□□□□□ -0.28
CNOT3-209ENST00000617930 CSN3P07498 182 aa13.33□□□□□ -0.28
CNOT3-209ENST00000617930 OR5AL1P0C617 328 aa13.33□□□□□ -0.28
CNOT3-209ENST00000617930 TMEM191AQ9H0A3 160 aa13.33□□□□□ -0.28
CNOT3-209ENST00000617930 A0A1B0GW15 77 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 S100A7P31151 101 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 ZNF138P52744 262 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 Q6AWC8 147 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 MAP1LC3CQ9BXW4 147 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 SELENOKQ9Y6D0 94 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 SH2D1AO60880 128 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
CNOT3-209ENST00000617930 TIMM8BQ9Y5J9 83 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-209ENST00000617930 NF1P21359 2839 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 HSBP1L1C9JCN9 74 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 ST20Q9HBF5 79 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 ESM1Q9NQ30 184 aa13.31□□□□□ -0.28
CNOT3-209ENST00000617930 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 GATD1Q8NB37 220 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 HIVEP1P15822 2718 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 H0Y8G0 127 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
CNOT3-209ENST00000617930 A0A0G2JLM5 398 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 hDV102S1A0JD36 115 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 NPFFR1Q9GZQ6 430 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 TMSB15BA0A087X1C1 80 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 SOCS3O14543 225 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 SAPCD1Q5SSQ6 148 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 FA2HQ7L5A8 372 aa13.29□□□□□ -0.28
CNOT3-209ENST00000617930 TMEM189A5PLL7 270 aa13.28□□□□□ -0.28
CNOT3-209ENST00000617930 LY6G6DO95868 133 aa13.28□□□□□ -0.28
CNOT3-209ENST00000617930 AP5S1Q9NUS5 200 aa13.28□□□□□ -0.28
CNOT3-209ENST00000617930 PEF1Q9UBV8 284 aaKnown RBP13.28□□□□□ -0.28
CNOT3-209ENST00000617930 DEFB1P60022 68 aa13.27□□□□□ -0.28
CNOT3-209ENST00000617930 Q6ZQT7 251 aa13.27□□□□□ -0.28
CNOT3-209ENST00000617930 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.28
CNOT3-209ENST00000617930 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
CNOT3-209ENST00000617930 DNAJC9-AS1A6NH13 148 aa13.26□□□□□ -0.29
CNOT3-209ENST00000617930 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
CNOT3-209ENST00000617930 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 TCF21O43680 179 aa13.25□□□□□ -0.29
CNOT3-209ENST00000617930 LYZL1Q6UWQ5 148 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms