RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 HYLS1Q96M11 299 aa17.56■□□□□ 0.4
VEGFA-228ENST00000617771 LENEPQ9Y5L5 61 aa17.56■□□□□ 0.4
VEGFA-228ENST00000617771 RAB2AP61019 212 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 OR10G4Q8NGN3 311 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 OR10G9Q8NGN4 311 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 OR10G7Q8NGN6 311 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 AQP10Q96PS8 301 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 TP53TG3Q9ULZ0 132 aa17.55■□□□□ 0.4
VEGFA-228ENST00000617771 NBDYA0A0U1RRE5 68 aa17.54■□□□□ 0.4
VEGFA-228ENST00000617771 PGPA6NDG6 321 aa17.54■□□□□ 0.4
VEGFA-228ENST00000617771 Q6ZQT7 251 aa17.54■□□□□ 0.4
VEGFA-228ENST00000617771 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
VEGFA-228ENST00000617771 ZNF415Q09FC8 603 aa17.53■□□□□ 0.4
VEGFA-228ENST00000617771 ASB13Q8WXK3 278 aa17.53■□□□□ 0.4
VEGFA-228ENST00000617771 RPH3ALQ9UNE2 315 aa17.53■□□□□ 0.4
VEGFA-228ENST00000617771 ARL6IP6Q8N6S5 226 aa17.52■□□□□ 0.4
VEGFA-228ENST00000617771 HSD17B11Q8NBQ5 300 aa17.52■□□□□ 0.4
VEGFA-228ENST00000617771 OR2G3Q8NGZ4 309 aa17.52■□□□□ 0.4
VEGFA-228ENST00000617771 GIPP09681 153 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-228ENST00000617771 CDC34P49427 236 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-228ENST00000617771 Q6AWC8 147 aa17.51■□□□□ 0.39
VEGFA-228ENST00000617771 PSMG3Q9BT73 122 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-228ENST00000617771 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
VEGFA-228ENST00000617771 MUC21Q5SSG8 566 aa17.5■□□□□ 0.39
VEGFA-228ENST00000617771 ST6GAL2Q96JF0 529 aa17.5■□□□□ 0.39
VEGFA-228ENST00000617771 MRPL16Q9NX20 251 aaKnown RBP17.5■□□□□ 0.39
VEGFA-228ENST00000617771 MBP02144 154 aa17.49■□□□□ 0.39
VEGFA-228ENST00000617771 FAM159AQ6UWV7 190 aa17.49■□□□□ 0.39
VEGFA-228ENST00000617771 GOLT1AQ6ZVE7 132 aa17.49■□□□□ 0.39
VEGFA-228ENST00000617771 Q9H8V8 135 aa17.49■□□□□ 0.39
VEGFA-228ENST00000617771 ARL14EPLP0DKL9 152 aa17.48■□□□□ 0.39
VEGFA-228ENST00000617771 ATP6V0CP27449 155 aa17.48■□□□□ 0.39
VEGFA-228ENST00000617771 ESRGQ1W209 222 aa17.48■□□□□ 0.39
VEGFA-228ENST00000617771 C6orf223Q8N319 242 aa17.48■□□□□ 0.39
VEGFA-228ENST00000617771 INO80EQ8NBZ0 244 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-228ENST00000617771 VSIG2Q96IQ7 327 aa17.48■□□□□ 0.39
VEGFA-228ENST00000617771 TRGV11A0A075B6L2 103 aa17.47■□□□□ 0.39
VEGFA-228ENST00000617771 STAG3L2P0CL84 134 aa17.47■□□□□ 0.39
VEGFA-228ENST00000617771 STAG3L3P0CL85 134 aa17.47■□□□□ 0.39
VEGFA-228ENST00000617771 SERF2P84101 59 aa17.47■□□□□ 0.39
VEGFA-228ENST00000617771 UPK3BQ9BT76 320 aa17.47■□□□□ 0.39
VEGFA-228ENST00000617771 SLAQ13239 276 aa17.46■□□□□ 0.39
VEGFA-228ENST00000617771 Q5BKY6 102 aa17.46■□□□□ 0.39
VEGFA-228ENST00000617771 TTC32Q5I0X7 151 aa17.46■□□□□ 0.39
VEGFA-228ENST00000617771 RAB24Q969Q5 203 aa17.46■□□□□ 0.39
VEGFA-228ENST00000617771 MRPS16Q9Y3D3 137 aaKnown RBP17.46■□□□□ 0.39
VEGFA-228ENST00000617771 A0A096LPF7 62 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 TMEM183BQ1AE95 376 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 TMEM183AQ8IXX5 376 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 SPXQ9BT56 116 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 MDFICQ9P1T7 246 aa17.45■□□□□ 0.38
VEGFA-228ENST00000617771 SERTM2A0A1B0GWG4 89 aa17.44■□□□□ 0.38
VEGFA-228ENST00000617771 PAX4O43316 350 aa17.44■□□□□ 0.38
VEGFA-228ENST00000617771 PRO0255Q9UI72 69 aa17.44■□□□□ 0.38
VEGFA-228ENST00000617771 NAGKQ9UJ70 344 aa17.44■□□□□ 0.38
VEGFA-228ENST00000617771 FXYD6-FXYD2A0A087WZ82 144 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 TRAV21A0A0B4J279 112 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 GCHFRP30047 84 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 GNG5P63218 68 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 TREM1Q9NP99 234 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 TNFSF18Q9UNG2 199 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 ICOSQ9Y6W8 199 aa17.43■□□□□ 0.38
VEGFA-228ENST00000617771 PKHD1P08F94 4074 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 PKD1P98161 4303 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 TRAV8-1A0A0A6YYK1 113 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 BORCS7-ASMTA0A0B4J1R7 106 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 TDRG1Q3Y452 100 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 C5orf17Q8NAS9 161 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 SUN5Q8TC36 379 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 NDFIP1Q9BT67 221 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 ACTR3CQ9C0K3 210 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-228ENST00000617771 SH3BGRL3Q9H299 93 aa17.42■□□□□ 0.38
VEGFA-228ENST00000617771 F6UZH7 168 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 CXorf1O96002 111 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 OR2T35Q8NGX2 323 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 TMEM167BQ9NRX6 74 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 HHLA3Q9XRX5 114 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 HERC2O95714 4834 aa17.41■□□□□ 0.38
VEGFA-228ENST00000617771 RNF222A6NCQ9 220 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 K7EQM0 130 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 MED14OSP0DP75 135 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 CRYBA4P53673 196 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 FHL2Q14192 279 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 RGS21Q2M5E4 152 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 RPL7L1Q6DKI1 246 aaKnown RBP17.4■□□□□ 0.38
VEGFA-228ENST00000617771 RASL10AQ92737 203 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 TVP23CQ96ET8 276 aa17.4■□□□□ 0.38
VEGFA-228ENST00000617771 TRGV4A0A0C4DH28 118 aa17.39■□□□□ 0.37
VEGFA-228ENST00000617771 A0A1W2PPQ1 181 aa17.39■□□□□ 0.37
VEGFA-228ENST00000617771 TCRAP04437 139 aa17.39■□□□□ 0.37
VEGFA-228ENST00000617771 TNP2Q05952 138 aa17.39■□□□□ 0.37
VEGFA-228ENST00000617771 C8orf49Q96NF6 230 aa17.39■□□□□ 0.37
VEGFA-228ENST00000617771 KCNS1Q96KK3 526 aa17.38■□□□□ 0.37
VEGFA-228ENST00000617771 SDF2L1Q9HCN8 221 aa17.38■□□□□ 0.37
VEGFA-228ENST00000617771 MRPL23Q16540 153 aaKnown RBP17.37■□□□□ 0.37
VEGFA-228ENST00000617771 IQCF2Q8IXL9 164 aa17.37■□□□□ 0.37
VEGFA-228ENST00000617771 SGK494Q96LW2 274 aa17.37■□□□□ 0.37
VEGFA-228ENST00000617771 MUC4Q99102 2169 aa17.37■□□□□ 0.37
VEGFA-228ENST00000617771 IGHV3-16A0A0C4DH30 117 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms