RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CHD8Q9HCK8 2581 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 TRAV8-6A0A0B4J262 113 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 C7orf71A4D174 169 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 PSMG3-AS1Q96PY0 264 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 VPS13CQ709C8 3753 aa9.09□□□□□ -0.95
C11orf54-215ENST00000617482 IGKV3D-20A0A0C4DH25 116 aa9.09□□□□□ -0.96
C11orf54-215ENST00000617482 LEPP41159 167 aa9.09□□□□□ -0.96
C11orf54-215ENST00000617482 NMUP48645 174 aa9.09□□□□□ -0.96
C11orf54-215ENST00000617482 Q6ZQT7 251 aa9.09□□□□□ -0.96
C11orf54-215ENST00000617482 COL25A1Q9BXS0 654 aaPredicted RBP9.09□□□□□ -0.96
C11orf54-215ENST00000617482 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.96
C11orf54-215ENST00000617482 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
C11orf54-215ENST00000617482 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
C11orf54-215ENST00000617482 OR1N2Q8NGR9 330 aa9.08□□□□□ -0.96
C11orf54-215ENST00000617482 LINC00527Q9UJ94 153 aa9.08□□□□□ -0.96
C11orf54-215ENST00000617482 SRSF2Q01130 221 aaKnown RBP9.07□□□□□ -0.96
C11orf54-215ENST00000617482 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 TMEM219Q86XT9 240 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 BOD1L2Q8IYS8 172 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 BPESC1Q9GZL8 116 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 NCOR2Q9Y618 2525 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 IGHV3OR16-10A0A075B7F0 116 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 TRGV3P03979 118 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 RAB9AP51151 201 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
C11orf54-215ENST00000617482 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 A1L4Q6 167 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 LY6DQ14210 128 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 METTL26Q96S19 204 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 PRSS1P07477 247 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 SEC11AP67812 179 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 TMEM78Q5T7P6 136 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
C11orf54-215ENST00000617482 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
C11orf54-215ENST00000617482 PEF1Q9UBV8 284 aaKnown RBP9.06□□□□□ -0.96
C11orf54-215ENST00000617482 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 RBAKDNA6NC62 111 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 FCER1GP30273 86 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 NPFFO15130 113 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 EFNA4P52798 201 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 UCNP55089 124 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 LMO4P61968 165 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 TMEM158Q8WZ71 300 aa9.05□□□□□ -0.96
C11orf54-215ENST00000617482 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
C11orf54-215ENST00000617482 COL12A1Q99715 3063 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 TRBV7-1A0A0A6YYK4 115 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 ATP5G2Q06055 141 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 C5orf56Q8N8D9 126 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 CITED1Q99966 193 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 HIVEP3Q5T1R4 2406 aa9.04□□□□□ -0.96
C11orf54-215ENST00000617482 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 GAGE12BA1L429 117 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 IGF1P05019 195 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 OR9G4Q8NGQ1 327 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 ITPR1Q14643 2758 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 A6NDN8 102 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 LINC01546A6NGU7 62 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 AP1S3Q96PC3 154 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 FOXC2Q99958 501 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 HHLA3Q9XRX5 114 aa9.03□□□□□ -0.96
C11orf54-215ENST00000617482 GAGE10A6NGK3 116 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 H3BUT2 72 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 SPRY2O43597 315 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 HSD52Q0P140 79 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 KLK9Q2XQG4 91 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 PGPEP1Q9NXJ5 209 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 KLK9Q9UKQ9 250 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 SMIM17P0DL12 118 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 BRD3OSQ6XYD6 125 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 Q8N8P6 123 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 NPFFR1Q9GZQ6 430 aa9.02□□□□□ -0.97
C11orf54-215ENST00000617482 IGLV2-18A0A075B6J9 118 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 C9orf118A6NHY6 69 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 H3BRM9 83 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 H3BVH4 76 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 SIVA1O15304 175 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 DEFB1P60022 68 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 OCIAD2Q56VL3 154 aa9.01□□□□□ -0.97
C11orf54-215ENST00000617482 PRR9Q5T870 116 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms