RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MRPS36P82909 103 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 ERHP84090 104 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 PLGLB1Q02325 96 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF345Q14585 488 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 KIAA2026Q5HYC2 2103 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 C1orf134Q5TEV5 83 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 Q8N814 137 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 LINC00301Q8NCQ3 95 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 OR8B3Q8NGG8 313 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 OR2T35Q8NGX2 323 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 OR10AC1Q8NH08 325 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CLEC2BQ92478 149 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CIB3Q96Q77 187 aaPredicted RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 TMEM191AQ9H0A3 160 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 CST9LQ9H4G1 147 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 NHP2Q9NX24 153 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 TAS2R4Q9NYW5 299 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 PSORS1C2Q9UIG4 136 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 LSM2Q9Y333 95 aaKnown RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 TPRKBQ9Y3C4 175 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 LY96Q9Y6Y9 160 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 FANCAO15360 1455 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 RAPGEF2Q9Y4G8 1499 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 SRCAPQ6ZRS2 3230 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 MROH2AA6NES4 1674 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 MGAMO43451 1857 aa1.35□□□□□ -2.19
SCAMP1-205ENST00000614488 RGS12O14924 1447 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 ARHGAP31Q2M1Z3 1444 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 KIAA0556O60303 1618 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 SCN3AQ9NY46 2000 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 LOC107984156A0A0G2JMH3 177 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 M0R233 179 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 CDC42EP2O14613 210 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 LYRM1O43325 122 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 CRPP02741 224 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 APODP05090 189 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 ROMO1P60602 79 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF90Q03938 601 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 CIRBPQ14011 172 aaKnown RBP1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 SNX29P2Q8IUI4 249 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 ARL17AQ8IVW1 177 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 C10orf111Q8N326 155 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 CCL4L1Q8NHW4 92 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 PP6455Q8WZ26 134 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 PPP3R2Q96LZ3 170 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 HYLS1Q96M11 299 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 OR4C12Q96R67 309 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 LINC00467Q9BRT7 94 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 SLC50A1Q9BRV3 221 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 PSMG3Q9BT73 122 aaPredicted RBP1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 CST11Q9H112 138 aa1.34□□□□□ -2.19
SCAMP1-205ENST00000614488 MYLKQ15746 1914 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 COL4A2P08572 1712 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 EFCAB5A4FU69 1503 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 AGLP35573 1532 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 KIDINS220Q9ULH0 1771 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 TMEM2Q9UHN6 1383 aa1.34□□□□□ -2.2
SCAMP1-205ENST00000614488 DEPDC5O75140 1603 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 RAPGEF6Q8TEU7 1601 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 RNF17Q9BXT8 1623 aaKnown RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 MYOM3Q5VTT5 1437 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 UACAQ9BZF9 1416 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 C3P01024 1663 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 CCDC88BA6NC98 1476 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 POLR1AO95602 1720 aaPredicted RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 MUC21A0A0G2JKD1 596 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 MUC21A0A140T8X8 626 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 LOC107986453A0A1B0GWG9 222 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 hDV103S1A0JD37 113 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 IBA57-AS1B1ANH7 110 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 FNDC10F2Z333 226 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 C5orf67F2Z3F1 127 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 C17orf112F2Z3M2 114 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 S100A8P05109 93 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 ASAH2BP0C7U1 165 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 PYYP10082 97 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 HIST1H1DP16402 221 aaKnown RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 CKS2P33552 79 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF93P35789 620 aaPredicted RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 SSR2P43308 183 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 LSM3P62310 102 aaKnown RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 MIC13Q5XKP0 118 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 ZNF826PQ6ZT77 177 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 LINC00471Q8N535 108 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 KCNRGQ8N5I3 272 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 OTOSQ8NHW6 89 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 RAB37Q96AX2 223 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 SLC35B3Q9H1N7 401 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 NDUFB11Q9NX14 153 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 CCDC167Q9P0B6 97 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 METTL1Q9UBP6 276 aaKnown RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 BOKQ9UMX3 212 aaPredicted RBP1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 CFAP74Q9C0B2 1584 aa1.33□□□□□ -2.2
SCAMP1-205ENST00000614488 KDM6AO15550 1401 aaPredicted RBP1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 KIAA1107Q9UPP5 1409 aa1.32□□□□□ -2.2
SCAMP1-205ENST00000614488 MED14O60244 1454 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms