RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
PRKN-208ENST00000610470 Q8TAT8 98 aa12.04□□□□□ -0.48
PRKN-208ENST00000610470 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
PRKN-208ENST00000610470 TNP2Q05952 138 aa12.03□□□□□ -0.48
PRKN-208ENST00000610470 ESRGQ1W209 222 aa12.03□□□□□ -0.48
PRKN-208ENST00000610470 Q5BKY6 102 aa12.03□□□□□ -0.48
PRKN-208ENST00000610470 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
PRKN-208ENST00000610470 TP53TG3Q9ULZ0 132 aa12.03□□□□□ -0.48
PRKN-208ENST00000610470 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
PRKN-208ENST00000610470 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
PRKN-208ENST00000610470 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
PRKN-208ENST00000610470 ZNF266Q14584 549 aa12.02□□□□□ -0.49
PRKN-208ENST00000610470 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
PRKN-208ENST00000610470 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.49
PRKN-208ENST00000610470 ST6GAL2Q96JF0 529 aa12.02□□□□□ -0.49
PRKN-208ENST00000610470 LENEPQ9Y5L5 61 aa12.02□□□□□ -0.49
PRKN-208ENST00000610470 A0A096LPF7 62 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 DIRC3C9JPN6 131 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 FAM74A1Q5RGS3 127 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 Q6ZQT7 251 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
PRKN-208ENST00000610470 A0A1W2PPQ1 181 aa12□□□□□ -0.49
PRKN-208ENST00000610470 A0A1W2PPV4 95 aa12□□□□□ -0.49
PRKN-208ENST00000610470 SLAQ13239 276 aa12□□□□□ -0.49
PRKN-208ENST00000610470 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
PRKN-208ENST00000610470 CMTM2Q8TAZ6 248 aa12□□□□□ -0.49
PRKN-208ENST00000610470 TMED6Q8WW62 240 aa12□□□□□ -0.49
PRKN-208ENST00000610470 ASB13Q8WXK3 278 aa12□□□□□ -0.49
PRKN-208ENST00000610470 HYLS1Q96M11 299 aa12□□□□□ -0.49
PRKN-208ENST00000610470 MRPL16Q9NX20 251 aaKnown RBP12□□□□□ -0.49
PRKN-208ENST00000610470 RYR1P21817 5038 aa11.99□□□□□ -0.49
PRKN-208ENST00000610470 PAX4O43316 350 aa11.99□□□□□ -0.49
PRKN-208ENST00000610470 MUC21Q5SSG8 566 aa11.99□□□□□ -0.49
PRKN-208ENST00000610470 Q6AWC8 147 aa11.99□□□□□ -0.49
PRKN-208ENST00000610470 PGPA6NDG6 321 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 EIF3GO75821 320 aaKnown RBP eCLIP11.98□□□□□ -0.49
PRKN-208ENST00000610470 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
PRKN-208ENST00000610470 FAM159AQ6UWV7 190 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 OR2T35Q8NGX2 323 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 MUC4Q99102 2169 aa11.98□□□□□ -0.49
PRKN-208ENST00000610470 PCLOQ9Y6V0 5065 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 RAB2AP61019 212 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 KRTAP1-5Q9BYS1 174 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 RPH3ALQ9UNE2 315 aa11.97□□□□□ -0.49
PRKN-208ENST00000610470 C16orf90A8MZG2 172 aa11.96□□□□□ -0.49
PRKN-208ENST00000610470 AQP10Q96PS8 301 aa11.96□□□□□ -0.49
PRKN-208ENST00000610470 SPXQ9BT56 116 aa11.96□□□□□ -0.49
PRKN-208ENST00000610470 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
PRKN-208ENST00000610470 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
PRKN-208ENST00000610470 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
PRKN-208ENST00000610470 FXYD6-FXYD2A0A087WZ82 144 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 CRYBA4P53673 196 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 FHL2Q14192 279 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 TMEM183BQ1AE95 376 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 GOLT1AQ6ZVE7 132 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 TMEM183AQ8IXX5 376 aa11.95□□□□□ -0.5
PRKN-208ENST00000610470 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 G3V3Q6 166 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 CDC34P49427 236 aaPredicted RBP11.94□□□□□ -0.5
PRKN-208ENST00000610470 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
PRKN-208ENST00000610470 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
PRKN-208ENST00000610470 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
PRKN-208ENST00000610470 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 SMLR1H3BR10 107 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 SIVA1O15304 175 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 HMGB3O15347 200 aaKnown RBP11.93□□□□□ -0.5
PRKN-208ENST00000610470 HSD17B11Q8NBQ5 300 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 RASL10AQ92737 203 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 PSMG3Q9BT73 122 aaPredicted RBP11.93□□□□□ -0.5
PRKN-208ENST00000610470 TNFSF18Q9UNG2 199 aa11.93□□□□□ -0.5
PRKN-208ENST00000610470 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 NXPH4O95158 308 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 MBP02144 154 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
PRKN-208ENST00000610470 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
PRKN-208ENST00000610470 GNG5P63218 68 aa11.91□□□□□ -0.5
PRKN-208ENST00000610470 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
PRKN-208ENST00000610470 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
PRKN-208ENST00000610470 ZNF479Q96JC4 524 aa11.91□□□□□ -0.5
PRKN-208ENST00000610470 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
PRKN-208ENST00000610470 HSPG2P98160 4391 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 TRAV8-1A0A0A6YYK1 113 aa11.9□□□□□ -0.5
PRKN-208ENST00000610470 F6UZH7 168 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms