RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 IGHV3-16A0A0C4DH30 117 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 IGLV2-11P01706 119 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 CAMLGP49069 296 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 PPP1R1AQ13522 171 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 TOR2AQ5JU69 321 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 LELP1Q5T871 98 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 EXOC3-AS1Q8N2X6 119 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 ZNF492Q9P255 531 aa10.09□□□□□ -0.79
NEDD8-MDP1-204ENST00000605847 PDE6HQ13956 83 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TMEM183BQ1AE95 376 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 FAM159AQ6UWV7 190 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TMEM183AQ8IXX5 376 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SOSTQ9BQB4 213 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 GGACTQ9BVM4 153 aa10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 NAA50Q9GZZ1 169 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SCGB1D2O95969 90 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 ASIPP42127 132 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 HNRNPA3P51991 378 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 ZNF138P52744 262 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 CTF1Q16619 201 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 MIC13Q5XKP0 118 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 FAM122CQ6P4D5 195 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 MCFD2Q8NI22 146 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 GGTLC3B5MD39 225 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TSC22D2O75157 780 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 NDUFB4O95168 129 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 MT1HL1P0DM35 61 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 UBE2MP61081 183 aaKnown RBP10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 BAK1Q16611 211 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 NRARPQ7Z6K4 114 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 RMI2Q96E14 147 aa10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 GPN1Q9HCN4 374 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TRBV7-9A0A0J9YWB2 115 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 FBLL1A6NHQ2 334 aaKnown RBP10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 M0R2P5 195 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TAS2R30P59541 319 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 Q8TAT8 98 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SLC25A21Q9BQT8 299 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TMEM14CQ9P0S9 112 aa10.05□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 PYYP10082 97 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 AP3S2P59780 193 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 RHOHQ15669 191 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 Q8N3U1 123 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SLC25A29Q8N8R3 303 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 DYNC2LI1Q8TCX1 351 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 RNF222A6NCQ9 220 aa10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 ZNF266Q14584 549 aa10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 Q6ZRU5 148 aa10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 TOMM5Q8N4H5 51 aa10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 SLC39A9Q9NUM3 307 aa10.03□□□□□ -0.8
NEDD8-MDP1-204ENST00000605847 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 Q6AWC8 147 aa10.02□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 RPH3ALQ9UNE2 315 aa10.02□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 LRP2P98164 4655 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 TRAV8-1A0A0A6YYK1 113 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 CSN1S1P47710 185 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 C20orf85Q9H1P6 137 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 GSKIPQ9P0R6 139 aa10.01□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 C9orf170A2RU37 121 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 C5orf51A6NDU8 294 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 L7N2F9 121 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 OR10J4P0C629 311 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 VAMP2P63027 116 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 BAXQ07812 192 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 IAH1Q2TAA2 248 aaPredicted RBP10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 ATP5SQ99766 215 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 UQCC1Q9NVA1 299 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 PKHD1L1Q86WI1 4243 aa10□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 C7orf66A4D0T2 115 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 GNRH2O43555 120 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 CIDEAO60543 219 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 BCAP31P51572 246 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 URGCP-MRPS24S4R325 110 aa9.99□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 NBEAP1P0C6P0 100 aa9.98□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 SEC11BP0C7V7 166 aa9.98□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 WDR83OSQ9Y284 106 aa9.98□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 UBE2L5PA0A1B0GUS4 154 aa9.97□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 CAV2P51636 162 aa9.97□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 SPCS2Q15005 226 aa9.97□□□□□ -0.81
NEDD8-MDP1-204ENST00000605847 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms