RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 A0A1W2PP55 124 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 ZNF815PA8K554 130 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DAZ2Q13117 558 aaKnown RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 C10orf128Q5T292 105 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 LINC00305Q7Z4B0 112 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DAZ4Q86SG3 579 aaKnown RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DEFB118Q96PH6 123 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DAZ3Q9NR90 486 aaKnown RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 C2orf16Q68DN1 1984 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 IGLV3-32A0A0A0MS00 114 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DUTP33316 252 aaKnown RBP6.8□□□□□ -1.32
COMMD3-215ENST00000602574 NNATQ16517 81 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 ORMDL2Q53FV1 153 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 VKORC1L1Q8N0U8 176 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 SPTSSAQ969W0 71 aa6.8□□□□□ -1.32
COMMD3-215ENST00000602574 TCF15Q12870 199 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 SLC25A29Q8N8R3 303 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 NFAM1Q8NET5 270 aaPredicted RBP6.79□□□□□ -1.32
COMMD3-215ENST00000602574 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 M0R1B8 84 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 PAX4O43316 350 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 GFRA3O60609 400 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 IGF1P05019 195 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
COMMD3-215ENST00000602574 GUSBP11Q6P575 273 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 ZNF714Q96N38 554 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 PROK2Q9HC23 129 aa6.79□□□□□ -1.32
COMMD3-215ENST00000602574 CD40P25942 277 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 HOXD3P31249 432 aaPredicted RBP6.78□□□□□ -1.32
COMMD3-215ENST00000602574 MAGEA5P43359 124 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 DEFB132Q7Z7B7 95 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 SLC50A1Q9BRV3 221 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 IQCF6A8MYZ5 107 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 LST1O00453 97 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 WISP1O95388 367 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 MSMPQ1L6U9 139 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 ZNF524Q96C55 264 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 ZNF837Q96EG3 531 aaPredicted RBP6.78□□□□□ -1.32
COMMD3-215ENST00000602574 CCDC140Q96MF4 163 aa6.78□□□□□ -1.32
COMMD3-215ENST00000602574 COX6CP09669 75 aa6.77□□□□□ -1.33
COMMD3-215ENST00000602574 GFRALQ6UXV0 394 aa6.77□□□□□ -1.33
COMMD3-215ENST00000602574 RNASE6Q93091 150 aaKnown RBP6.77□□□□□ -1.33
COMMD3-215ENST00000602574 MYO7BQ6PIF6 2116 aa6.77□□□□□ -1.33
COMMD3-215ENST00000602574 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 H7BZZ5 65 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 IGHV3-13P01766 116 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 SAA4P35542 130 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 MYO7AQ13402 2215 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 SNRPD3P62318 126 aaKnown RBP6.76□□□□□ -1.33
COMMD3-215ENST00000602574 NSUN5P1Q3KNT7 163 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 Q86TA4 180 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
COMMD3-215ENST00000602574 CKS2P33552 79 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 ZNF542PQ5EBM4 170 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 RNF186Q9NXI6 227 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 NDUFC1O43677 76 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 IGHV4-39P01824 125 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 CCKP06307 115 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 INAFM2P0DMQ5 153 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 UBE2E1P51965 193 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 PAPPA-AS1Q5QFB9 102 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 FXYD5Q96DB9 178 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 UBE2E2Q96LR5 201 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 U3KQE9 123 aa6.75□□□□□ -1.33
COMMD3-215ENST00000602574 CCL21O00585 134 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 TRIAP1O43715 76 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 TIMM17BO60830 172 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 XCL1P47992 114 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 FXYD7P58549 80 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RHOHQ15669 191 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 BEAN1Q3B7T3 259 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 TM2D3Q9BRN9 247 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 XCL2Q9UBD3 114 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1BA6NDE4 496 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1EA6NEQ0 496 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 C10orf142B7Z368 130 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 NDUFA3O95167 84 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1DP0C7P1 496 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 DEFB103AP81534 67 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
COMMD3-215ENST00000602574 NUP37Q8NFH4 326 aa6.74□□□□□ -1.33
COMMD3-215ENST00000602574 IGLV2-18A0A075B6J9 118 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 IBA57-AS1B1ANH7 110 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
COMMD3-215ENST00000602574 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms