RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 LINC00479Q96M42 142 aa14.27□□□□□ -0.13
SSBP4-210ENST00000601444 LENEPQ9Y5L5 61 aa14.27□□□□□ -0.13
SSBP4-210ENST00000601444 DEFB131BA0A096LNP1 70 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 IGLV2-11P01706 119 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 NKX2-5P52952 324 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-210ENST00000601444 DPPA3Q6W0C5 159 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 ZNF493Q6ZR52 646 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 CCDC28AQ8IWP9 274 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 C2CD4CQ8TF44 421 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 NOP10Q9NPE3 64 aaKnown RBP14.26□□□□□ -0.13
SSBP4-210ENST00000601444 TP53TG3Q9ULZ0 132 aa14.26□□□□□ -0.13
SSBP4-210ENST00000601444 LCE6AA0A183 80 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 LYRM9A8MSI8 78 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 IGLL5B9A064 214 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 F6UZH7 168 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 IFNA7P01567 189 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 H2AFB1P0C5Y9 115 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 DEFB130BP0DP73 79 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 DEFB130AP0DP74 79 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 DAD1P61803 113 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 PSG8Q9UQ74 426 aa14.25□□□□□ -0.13
SSBP4-210ENST00000601444 TIMM8BQ9Y5J9 83 aaPredicted RBP14.25□□□□□ -0.13
SSBP4-210ENST00000601444 RYR3Q15413 4870 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 TRAV34A0A0B4J273 112 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 TEX48A0A1B0GUV7 120 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 SERTM2A0A1B0GWG4 89 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 MUC21Q5SSG8 566 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 EIF4E3Q8N5X7 224 aaKnown RBP14.24□□□□□ -0.13
SSBP4-210ENST00000601444 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 C8orf49Q96NF6 230 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 LINC00467Q9BRT7 94 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 ATG101Q9BSB4 218 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 TREM1Q9NP99 234 aa14.24□□□□□ -0.13
SSBP4-210ENST00000601444 IGHV1OR15-1A0A075B7D0 117 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 CBY3A6NI87 242 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 RGS13O14921 159 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 PAGE4O60829 102 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 HTN3P15516 51 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 ATP5G3P48201 142 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 CCL20P78556 96 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 CST9LP1Q5W188 147 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 Q6AWC8 147 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 PRNTQ86SH4 94 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
SSBP4-210ENST00000601444 K7EQM0 130 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 PEX7O00628 323 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 SULT1A2P50226 295 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 FLI1Q01543 452 aaPredicted RBP14.22□□□□□ -0.13
SSBP4-210ENST00000601444 ANXA2RQ3ZCQ2 193 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 EIF5AL1Q6IS14 154 aaKnown RBP14.22□□□□□ -0.13
SSBP4-210ENST00000601444 TMEM75Q8N9X5 138 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 C11orf72Q8NBR9 251 aa14.22□□□□□ -0.13
SSBP4-210ENST00000601444 NKX6-2Q9C056 277 aaPredicted RBP14.22□□□□□ -0.13
SSBP4-210ENST00000601444 BOLA1Q9Y3E2 137 aa14.21□□□□□ -0.13
SSBP4-210ENST00000601444 KLF12Q9Y4X4 402 aa14.21□□□□□ -0.13
SSBP4-210ENST00000601444 DNAH1Q9P2D7 4330 aa14.21□□□□□ -0.14
SSBP4-210ENST00000601444 SNURFLB1AK76 121 aa14.2□□□□□ -0.14
SSBP4-210ENST00000601444 RAB5CP51148 216 aa14.2□□□□□ -0.14
SSBP4-210ENST00000601444 ZNF80P51504 273 aaPredicted RBP14.2□□□□□ -0.14
SSBP4-210ENST00000601444 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
SSBP4-210ENST00000601444 ALMS1Q8TCU4 4167 aa14.2□□□□□ -0.14
SSBP4-210ENST00000601444 IGHV4-4A0A075B6R2 117 aa14.19□□□□□ -0.14
SSBP4-210ENST00000601444 HIST1H2BAQ96A08 127 aa14.19□□□□□ -0.14
SSBP4-210ENST00000601444 NDFIP1Q9BT67 221 aa14.19□□□□□ -0.14
SSBP4-210ENST00000601444 NAGKQ9UJ70 344 aa14.19□□□□□ -0.14
SSBP4-210ENST00000601444 GAGE12BA1L429 117 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 GAGE7O76087 117 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 GAGE12FP0CL80 117 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 GAGE12GP0CL81 117 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 GAGE12IP0CL82 117 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 DAZ2Q13117 558 aaKnown RBP14.18□□□□□ -0.14
SSBP4-210ENST00000601444 ZNF680Q8NEM1 530 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 LINC00476Q8WZB0 136 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 MDFICQ9P1T7 246 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 ARL2-SNX15V9GYD0 113 aa14.18□□□□□ -0.14
SSBP4-210ENST00000601444 TRAV21A0A0B4J279 112 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 GCGP01275 180 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 FAM159AQ6UWV7 190 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 Q6ZTI0 123 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 LINC00612Q8N6U2 182 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 RYR2Q92736 4967 aa14.17□□□□□ -0.14
SSBP4-210ENST00000601444 TRAV1-1A0A0B4J248 108 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 GNRH2O43555 120 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 LY6G6CO95867 125 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 TCL1AP56279 114 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 TMEM183BQ1AE95 376 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 IBA57Q5T440 356 aaKnown RBP14.16□□□□□ -0.14
SSBP4-210ENST00000601444 ALKAL2Q6UX46 152 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 TMEM183AQ8IXX5 376 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 GNG13Q9P2W3 67 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 C11orf21Q9P2W6 132 aa14.16□□□□□ -0.14
SSBP4-210ENST00000601444 FBLL1A6NHQ2 334 aaKnown RBP14.15□□□□□ -0.14
SSBP4-210ENST00000601444 PPT1P50897 306 aa14.15□□□□□ -0.14
SSBP4-210ENST00000601444 SMUG1Q53HV7 270 aa14.15□□□□□ -0.14
SSBP4-210ENST00000601444 SAPCD1Q5SSQ6 148 aa14.15□□□□□ -0.14
SSBP4-210ENST00000601444 Q86TA4 180 aa14.15□□□□□ -0.14
SSBP4-210ENST00000601444 HYDINQ4G0P3 5121 aa14.15□□□□□ -0.14
SSBP4-210ENST00000601444 SCO2A0A1W2PP80 73 aa14.14□□□□□ -0.15
SSBP4-210ENST00000601444 ATP5G1P05496 136 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms