RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 TMEM11P17152 192 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 PRTN3P24158 256 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 C15orf32Q32M92 178 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 NBASA2RRP1 2371 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 ODF3BA8MYP8 253 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 CLEC3BP05452 202 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 LAGE3Q14657 143 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 ECSCRQ19T08 205 aa13.43□□□□□ -0.26
ARHGEF1-213ENST00000595897 M0R1W7 72 aa13.42□□□□□ -0.26
ARHGEF1-213ENST00000595897 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
ARHGEF1-213ENST00000595897 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
ARHGEF1-213ENST00000595897 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
ARHGEF1-213ENST00000595897 TM2D2Q9BX73 214 aa13.42□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 BUB3O43684 328 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 AGPAT4-IT1Q9H0P7 198 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 DCHS2Q6V1P9 2916 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGHV7-81A0A0B4J1V7 117 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 C11orf21Q9P2W6 132 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 ZNF292O60281 2723 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 GOSR1O95249 250 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 RAB9AP51151 201 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 PHLDA1Q8WV24 401 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 HIST1H4GQ99525 98 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 SLC50A1Q9BRV3 221 aa13.41□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGLV2-18A0A075B6J9 118 aa13.4□□□□□ -0.26
ARHGEF1-213ENST00000595897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.4□□□□□ -0.26
ARHGEF1-213ENST00000595897 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
ARHGEF1-213ENST00000595897 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
ARHGEF1-213ENST00000595897 EFNA4P52798 201 aa13.4□□□□□ -0.26
ARHGEF1-213ENST00000595897 RBAKDNA6NC62 111 aa13.39□□□□□ -0.27
ARHGEF1-213ENST00000595897 PTPRZ1P23471 2315 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-213ENST00000595897 PSMG3-AS1Q96PY0 264 aa13.39□□□□□ -0.27
ARHGEF1-213ENST00000595897 VKORC1Q9BQB6 163 aa13.39□□□□□ -0.27
ARHGEF1-213ENST00000595897 ZNF207O43670 478 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 A0A087WX48 190 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 IGLL5B9A064 214 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 SRSF1Q07955 248 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■■■□ 21.3
ARHGEF1-213ENST00000595897 CLEC19AQ6UXS0 136 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 ZNF502Q8TBZ5 544 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 KLK15Q9H2R5 256 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 Q8N6K4 173 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 NRACQ8N912 160 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 ZFAND3Q9H8U3 227 aa13.38□□□□□ -0.27
ARHGEF1-213ENST00000595897 PLNP26678 52 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 FOXI2Q6ZQN5 318 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 SPTBN1Q01082 2364 aaKnown RBP13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 E9PLD3 99 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 H3BMG7 143 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 WFDC2Q14508 124 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 GTSF1LQ9H1H1 148 aa13.37□□□□□ -0.27
ARHGEF1-213ENST00000595897 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 Q6ZQT7 251 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 RELNP78509 3460 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 H3BVH4 76 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 J3KRW8 73 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 J3QR89 54 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 Q8N9W7 124 aa13.36□□□□□ -0.27
ARHGEF1-213ENST00000595897 F8W1H4 67 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 AMTNQ6UX39 209 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 FAM110DQ8TAY7 271 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 METTL26Q96S19 204 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 AGRNO00468 2067 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 OOSP1A8MZH6 123 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 TAL2Q16559 108 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 C8orf86Q6ZUL3 223 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 CEP295Q9C0D2 2601 aa13.35□□□□□ -0.27
ARHGEF1-213ENST00000595897 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 OR11H1Q8NG94 326 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 OR11H2Q8NH07 326 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 SMAGPQ0VAQ4 97 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 EBI3Q14213 229 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 ETDBQ3ZM63 59 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 MINOS1Q5TGZ0 78 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 MTURNQ8N3F0 131 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 SIGMAR1Q99720 223 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 MINOS1-NBL1R4GNA1 71 aa13.34□□□□□ -0.27
ARHGEF1-213ENST00000595897 CLPSL1A2RUU4 121 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 H7C1H1 209 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 AZU1P20160 251 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 TSSC4Q9Y5U2 329 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 TRAV8-2A0A0B4J237 113 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 F8VRH5 84 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 G3V318 75 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 SH2D6Q7Z4S9 175 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 SCGB3A1Q96QR1 104 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
ARHGEF1-213ENST00000595897 CCDC140Q96MF4 163 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms