RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 TMEM258P61165 79 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 KLK9Q9UKQ9 250 aa10.37□□□□□ -0.75
RNF43-208ENST00000584437 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 GATA3P23771 443 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 CRYBA4P53673 196 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 ARTNQ5T4W7 220 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 FAM120AOSQ5T036 256 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 IGHV1-69DA0A0B4J2H0 117 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 B5MCH6 92 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 LENEPQ9Y5L5 61 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 ZNRF2Q8NHG8 242 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 BPESC1Q9GZL8 116 aa10.36□□□□□ -0.75
RNF43-208ENST00000584437 XIRP1Q702N8 1843 aaKnown RBP10.36□□□□□ -0.75
RNF43-208ENST00000584437 SBF1O95248 1867 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 PLXNA3P51805 1871 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 IGLL5B9A064 214 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 PCP2Q8IVA1 136 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 MRPL53Q96EL3 112 aaKnown RBP10.35□□□□□ -0.75
RNF43-208ENST00000584437 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 ZNF134P52741 427 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 MYO7BQ6PIF6 2116 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 CEACAM8P31997 349 aaPredicted RBP10.35□□□□□ -0.75
RNF43-208ENST00000584437 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 FER1L5A0AVI2 2057 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
RNF43-208ENST00000584437 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 TCTEX1D4Q5JR98 221 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 TRIOBPQ9H2D6 2365 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 G3V318 75 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 FOXI2Q6ZQN5 318 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 Q6ZVH6 145 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 PROK2Q9HC23 129 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 TPSG1Q9NRR2 321 aa10.34□□□□□ -0.75
RNF43-208ENST00000584437 IGHV1-69P01742 117 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 PRSS47A8MTI9 375 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 LINC01619G3V211 115 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 IGLV1-44P01699 117 aa10.33□□□□□ -0.76
RNF43-208ENST00000584437 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
RNF43-208ENST00000584437 LY6HO94772 140 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 ZSWIM8A7E2V4 1837 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 IGLV3-9A0A075B6K5 115 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 BAALC-AS2P0C853 105 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
RNF43-208ENST00000584437 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 PSCAO43653 123 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 WISP1O95388 367 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 HIGD1BQ9P298 99 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 ROS1P08922 2347 aa10.32□□□□□ -0.76
RNF43-208ENST00000584437 NXPH4O95158 308 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 RBM3P98179 157 aaKnown RBP10.31□□□□□ -0.76
RNF43-208ENST00000584437 HERV-K104P63124 156 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 ZNF524Q96C55 264 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 SS18L2Q9UHA2 77 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 MSMBP08118 114 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 DUX4L9Q6RFH8 374 aaPredicted RBP10.31□□□□□ -0.76
RNF43-208ENST00000584437 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 KAAG1Q9UBP8 84 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 THADAQ6YHU6 1953 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
RNF43-208ENST00000584437 CNOT1A5YKK6 2376 aaKnown RBP10.3□□□□□ -0.76
RNF43-208ENST00000584437 TRPM7Q96QT4 1865 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 TRAV25A0A0B4J276 109 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 TINCRA0A1B0GVN0 87 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 ZNF503-AS2A6NEH8 195 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 NUPR1O60356 82 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 LY6DQ14210 128 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 CFHR4Q92496 578 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 ORMDL1Q9P0S3 153 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 WDR90Q96KV7 1748 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 ASPHD1Q5U4P2 390 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
RNF43-208ENST00000584437 H3BUA1 57 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 RNASE8Q8TDE3 154 aaKnown RBP10.29□□□□□ -0.76
RNF43-208ENST00000584437 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 DYNAPQ8N1N2 210 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 YLPM1P49750 1951 aaKnown RBP10.29□□□□□ -0.76
RNF43-208ENST00000584437 ARFGEF3Q5TH69 2177 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 DAD1P61803 113 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 DOCK10Q96BY6 2186 aa10.29□□□□□ -0.76
RNF43-208ENST00000584437 UNQ6494/PRO21346Q6UXR6 183 aa10.28□□□□□ -0.76
RNF43-208ENST00000584437 ATOX1O00244 68 aa10.28□□□□□ -0.76
RNF43-208ENST00000584437 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
RNF43-208ENST00000584437 TDRG1Q3Y452 100 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms