RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 STAG3L3P0CL85 134 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 GOLT1AQ6ZVE7 132 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 ARPC5LQ9BPX5 153 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 ACTR3CQ9C0K3 210 aaPredicted RBP14.32□□□□□ -0.12
SS18-224ENST00000584083 TP53TG3Q9ULZ0 132 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 KLF12Q9Y4X4 402 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 LENEPQ9Y5L5 61 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 TRGV2A0A075B6R0 118 aa14.31□□□□□ -0.12
SS18-224ENST00000584083 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
SS18-224ENST00000584083 GCHFRP30047 84 aa14.31□□□□□ -0.12
SS18-224ENST00000584083 TMPRSS5Q9H3S3 457 aa14.31□□□□□ -0.12
SS18-224ENST00000584083 BIRC6Q9NR09 4857 aa14.3□□□□□ -0.12
SS18-224ENST00000584083 TCL1AP56279 114 aa14.3□□□□□ -0.12
SS18-224ENST00000584083 MUC21Q5SSG8 566 aa14.3□□□□□ -0.12
SS18-224ENST00000584083 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
SS18-224ENST00000584083 ARL6IP6Q8N6S5 226 aa14.3□□□□□ -0.12
SS18-224ENST00000584083 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
SS18-224ENST00000584083 TRAV26-1A0A087WT03 109 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 ARPC5O15511 151 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 CXorf1O96002 111 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 HOXA5P20719 270 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 GNG5P63218 68 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 DNAH10Q8IVF4 4471 aa14.29□□□□□ -0.12
SS18-224ENST00000584083 A0A0J9YY99 117 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 G3V3Q6 166 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 ZNF415Q09FC8 603 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 LGALS9BQ3B8N2 356 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 ST6GAL2Q96JF0 529 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 TMEM167BQ9NRX6 74 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 FRAS1Q86XX4 4008 aa14.28□□□□□ -0.12
SS18-224ENST00000584083 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.13
SS18-224ENST00000584083 SPINK4O60575 86 aa14.27□□□□□ -0.13
SS18-224ENST00000584083 CCL18P55774 89 aa14.27□□□□□ -0.13
SS18-224ENST00000584083 FAM3BP58499 235 aaPredicted RBP14.27□□□□□ -0.13
SS18-224ENST00000584083 Q6AWC8 147 aa14.27□□□□□ -0.13
SS18-224ENST00000584083 FAM159AQ6UWV7 190 aa14.27□□□□□ -0.13
SS18-224ENST00000584083 SMLR1H3BR10 107 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 TAAR5O14804 337 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 C5orf17Q8NAS9 161 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 SUN5Q8TC36 379 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 TREM1Q9NP99 234 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 MRPL16Q9NX20 251 aaKnown RBP14.26□□□□□ -0.13
SS18-224ENST00000584083 NAGKQ9UJ70 344 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 MUC4Q99102 2169 aa14.26□□□□□ -0.13
SS18-224ENST00000584083 K7EQM0 130 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 TMEM183BQ1AE95 376 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 SSX7Q7RTT5 188 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 TMEM183AQ8IXX5 376 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 SGK494Q96LW2 274 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 C18orf15Q96N68 181 aa14.25□□□□□ -0.13
SS18-224ENST00000584083 SERTM2A0A1B0GWG4 89 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 F6UZH7 168 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 SUMO1P63165 101 aaKnown RBP14.24□□□□□ -0.13
SS18-224ENST00000584083 LINC00336Q6ZUF6 198 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 TVP23CQ96ET8 276 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 NDFIP1Q9BT67 221 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
SS18-224ENST00000584083 TRGV11A0A075B6L2 103 aa14.23□□□□□ -0.13
SS18-224ENST00000584083 CTXND1A0A1B0GTU2 59 aa14.23□□□□□ -0.13
SS18-224ENST00000584083 TCRAP04437 139 aa14.23□□□□□ -0.13
SS18-224ENST00000584083 Q6ZR54 194 aa14.23□□□□□ -0.13
SS18-224ENST00000584083 LINC00588Q9Y4M8 146 aa14.23□□□□□ -0.13
SS18-224ENST00000584083 TRAV21A0A0B4J279 112 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 H3BNG1 76 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 ZNF726P1Q15940 193 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 CYTL1Q9NRR1 136 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 EPDR1Q9UM22 224 aa14.22□□□□□ -0.13
SS18-224ENST00000584083 GGTLC3B5MD39 225 aa14.21□□□□□ -0.13
SS18-224ENST00000584083 ZNRF2Q8NHG8 242 aa14.21□□□□□ -0.13
SS18-224ENST00000584083 A0A1W2PRE2 83 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 RTL8CO15255 209 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 FGF8P55075 233 aaPredicted RBP14.2□□□□□ -0.14
SS18-224ENST00000584083 CYB561D1Q8N8Q1 229 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 VSIG2Q96IQ7 327 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 SPXQ9BT56 116 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 PSG8Q9UQ74 426 aa14.2□□□□□ -0.14
SS18-224ENST00000584083 GNRH2O43555 120 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 IFNA7P01567 189 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 UBE2G2P60604 165 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 TDRG1Q3Y452 100 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 SOHLH1Q5JUK2 328 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 PRNTQ86SH4 94 aa14.19□□□□□ -0.14
SS18-224ENST00000584083 PRSS29PA6NIE9 313 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 PAX4O43316 350 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 FLI1Q01543 452 aaPredicted RBP14.18□□□□□ -0.14
SS18-224ENST00000584083 C1orf134Q5TEV5 83 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 KCNRGQ8N5I3 272 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 C8orf49Q96NF6 230 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 SDF2L1Q9HCN8 221 aa14.18□□□□□ -0.14
SS18-224ENST00000584083 ZNF345Q14585 488 aa14.17□□□□□ -0.14
SS18-224ENST00000584083 ESRGQ1W209 222 aa14.17□□□□□ -0.14
SS18-224ENST00000584083 KCNS1Q96KK3 526 aa14.17□□□□□ -0.14
SS18-224ENST00000584083 A0A096LPF7 62 aa14.16□□□□□ -0.14
SS18-224ENST00000584083 TRGV4A0A0C4DH28 118 aa14.16□□□□□ -0.14
SS18-224ENST00000584083 IGHV3-16A0A0C4DH30 117 aa14.16□□□□□ -0.14
SS18-224ENST00000584083 NBDYA0A0U1RRE5 68 aa14.16□□□□□ -0.14
SS18-224ENST00000584083 MAP1LC3B2A6NCE7 125 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms