RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LYZL4Q96KX0 146 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 TRBV6-7A0A0A0MS04 114 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 AMBPP02760 352 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 BRWD3Q6RI45 1802 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 DEFB4AO15263 64 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 LMO1P25800 156 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 PSMB8P28062 276 aa12.79□□□□□ -0.36
CACNA1A-202ENST00000573710 COL18A1P39060 1754 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 NYNRINQ9P2P1 1898 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 SPRY2O43597 315 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 IGHV4-61A0A0C4DH41 118 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 C3orf79P0CE67 100 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 LINC01590Q5TEZ4 76 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 HERV-K104P63124 156 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
CACNA1A-202ENST00000573710 ARID2Q68CP9 1835 aa12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 H0YJW9 148 aa12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 GLRX5Q86SX6 157 aa12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 WDR86Q86TI4 376 aa12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 SBF2Q86WG5 1849 aa12.77□□□□□ -0.36
CACNA1A-202ENST00000573710 OBSL1O75147 1896 aa12.77□□□□□ -0.37
CACNA1A-202ENST00000573710 IGHV1-24A0A0C4DH33 117 aa12.77□□□□□ -0.37
CACNA1A-202ENST00000573710 DLEU1O43261 78 aa12.77□□□□□ -0.37
CACNA1A-202ENST00000573710 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
CACNA1A-202ENST00000573710 TECTAO75443 2155 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 TEX36Q5VZQ5 186 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 SLAQ13239 276 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 X6R8D5 127 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 CD177Q8N6Q3 437 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 TRGV9Q99603 122 aa12.76□□□□□ -0.37
CACNA1A-202ENST00000573710 ADAMTS9Q9P2N4 1935 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 MESP1Q9BRJ9 268 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 HGFACQ04756 655 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 PPDPFLQ8WWR9 84 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 AGMATQ9BSE5 352 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 IGKV2-24A0A0C4DH68 120 aa12.75□□□□□ -0.37
CACNA1A-202ENST00000573710 CEND1Q8N111 149 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 PRO1854Q9UHT4 67 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 PIFOQ8TCI5 191 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 EXPH5Q8NEV8 1989 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 LRP5O75197 1615 aa12.74□□□□□ -0.37
CACNA1A-202ENST00000573710 HIST2H2BCQ6DN03 193 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 WFDC10BQ8IUB3 73 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 KLF2Q9Y5W3 355 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 CCL24O00175 119 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 ATG2AQ2TAZ0 1938 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 MRPL55Q7Z7F7 128 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 HEPN1Q6WQI6 88 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 DAND5Q8N907 189 aa12.73□□□□□ -0.37
CACNA1A-202ENST00000573710 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 SMIM20Q8N5G0 67 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 Q9H8V8 135 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 A0A087WV48 116 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 C2orf66Q6UXQ4 117 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 TMEM141Q96I45 108 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 TRBV5-3A0A0A0MS03 114 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 SMIM27A0A1W2PRY6 76 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 GYPEP15421 78 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 RNF126Q9BV68 326 aa12.72□□□□□ -0.37
CACNA1A-202ENST00000573710 HIST3H2BBQ8N257 126 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 E7EQL1 145 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 ELANEP08246 267 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 ZFP2Q6ZN57 461 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 GFI1Q99684 422 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
CACNA1A-202ENST00000573710 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.38
CACNA1A-202ENST00000573710 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.38
CACNA1A-202ENST00000573710 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 USP17L23D6RBM5 183 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 NTF4P34130 210 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 GAFA1Q96PS6 74 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 COL11A2P13942 1736 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 IGKV1-9A0A0C4DH69 117 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 ZNF883P0CG24 379 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 MRPL36Q9P0J6 103 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 IGFBP3P17936 291 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-202ENST00000573710 CTHRC1Q96CG8 243 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms