RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 LINC00469Q8N7U9 141 aa12.4□□□□□ -0.42
POLR2A-201ENST00000572844 ZNF738Q8NE65 137 aa12.4□□□□□ -0.42
POLR2A-201ENST00000572844 C11orf21Q9P2W6 132 aa12.4□□□□□ -0.42
POLR2A-201ENST00000572844 OR4C46A6NHA9 309 aa12.39□□□□□ -0.43
POLR2A-201ENST00000572844 CKS2P33552 79 aa12.39□□□□□ -0.43
POLR2A-201ENST00000572844 IFI27P40305 119 aaPredicted RBP12.39□□□□□ -0.43
POLR2A-201ENST00000572844 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■□□□ 13
POLR2A-201ENST00000572844 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
POLR2A-201ENST00000572844 IGHV4-4A0A075B6R2 117 aa12.39□□□□□ -0.43
POLR2A-201ENST00000572844 ZNF747Q9BV97 191 aa12.39□□□□□ -0.43
POLR2A-201ENST00000572844 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
POLR2A-201ENST00000572844 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
POLR2A-201ENST00000572844 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 IGLL1P15814 213 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 PSMB8P28062 276 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 OR10J6PQ8NGY7 276 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 SPG11Q96JI7 2443 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 SNAI2O43623 268 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 FSHBP01225 129 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 IGHV4-59P01825 116 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 SSTP61278 116 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 LINC01545Q5VT33 79 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 MSRB1Q9NZV6 116 aa12.38□□□□□ -0.43
POLR2A-201ENST00000572844 CACNG7P62955 275 aa12.37□□□□□ -0.43
POLR2A-201ENST00000572844 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
POLR2A-201ENST00000572844 Q6ZN92 141 aa12.37□□□□□ -0.43
POLR2A-201ENST00000572844 RHPN1-AS1Q9BWJ2 59 aa12.37□□□□□ -0.43
POLR2A-201ENST00000572844 BEX4Q9NWD9 120 aaPredicted RBP12.37□□□□□ -0.43
POLR2A-201ENST00000572844 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
POLR2A-201ENST00000572844 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
POLR2A-201ENST00000572844 CSMD1Q96PZ7 3565 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 A0A096LNJ9 63 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 TCF21O43680 179 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 TGFAP01135 160 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 NPYP01303 97 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
POLR2A-201ENST00000572844 FAM106AQ4KMX7 169 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
POLR2A-201ENST00000572844 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
POLR2A-201ENST00000572844 FOXE3Q13461 319 aa12.35□□□□□ -0.43
POLR2A-201ENST00000572844 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
POLR2A-201ENST00000572844 CR1P17927 2039 aa12.35□□□□□ -0.43
POLR2A-201ENST00000572844 TSPOP30536 169 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 LCNL1Q6ZST4 164 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 HBDP02042 147 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
POLR2A-201ENST00000572844 TM4SF20Q53R12 229 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
POLR2A-201ENST00000572844 UTP20O75691 2785 aaKnown RBP12.34□□□□□ -0.43
POLR2A-201ENST00000572844 SMKR1H3BMG3 65 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 PRR9Q5T870 116 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 Q6YL49 198 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 DEFB125Q8N687 156 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 OR8A1Q8NGG7 326 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 VPREB3Q9UKI3 123 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 TMEM95Q3KNT9 176 aa12.33□□□□□ -0.44
POLR2A-201ENST00000572844 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
POLR2A-201ENST00000572844 FAM208BQ5VWN6 2430 aa12.32□□□□□ -0.44
POLR2A-201ENST00000572844 PRSS47A8MTI9 375 aa12.32□□□□□ -0.44
POLR2A-201ENST00000572844 NCR2O95944 276 aa12.32□□□□□ -0.44
POLR2A-201ENST00000572844 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
POLR2A-201ENST00000572844 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
POLR2A-201ENST00000572844 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
POLR2A-201ENST00000572844 ID1P41134 155 aa12.31□□□□□ -0.44
POLR2A-201ENST00000572844 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
POLR2A-201ENST00000572844 UBR5O95071 2799 aaPredicted RBP12.31□□□□□ -0.44
POLR2A-201ENST00000572844 PRRC2AP48634 2157 aaKnown RBP12.31□□□□□ -0.44
POLR2A-201ENST00000572844 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
POLR2A-201ENST00000572844 DEFB113Q30KQ7 82 aa12.31□□□□□ -0.44
POLR2A-201ENST00000572844 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
POLR2A-201ENST00000572844 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 A1L4Q6 167 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 ELANEP08246 267 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 LGALS9BQ3B8N2 356 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 DPF1Q92782 380 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 CRYBG3Q68DQ2 2970 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 CSPG4Q6UVK1 2322 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 TCAPO15273 167 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
POLR2A-201ENST00000572844 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
POLR2A-201ENST00000572844 EVI2AP22794 236 aa12.29□□□□□ -0.44
POLR2A-201ENST00000572844 Q6ZQT7 251 aa12.29□□□□□ -0.44
POLR2A-201ENST00000572844 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms