RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SPINK4O60575 86 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 CD300CQ08708 224 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 FAM159AQ6UWV7 190 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 ST6GAL2Q96JF0 529 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 SPXQ9BT56 116 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 GSN-AS1Q9NRJ2 163 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
USB1-211ENST00000565662 PGPA6NDG6 321 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 PRSS29PA6NIE9 313 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 TP53TG3Q9ULZ0 132 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
USB1-211ENST00000565662 FRAS1Q86XX4 4008 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 TRAV21A0A0B4J279 112 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 A0A1W2PPQ1 181 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 TAAR5O14804 337 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 CXorf1O96002 111 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
USB1-211ENST00000565662 RAB2AP61019 212 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 TDRG1Q3Y452 100 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 Q6ZTI0 123 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 HYLS1Q96M11 299 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
USB1-211ENST00000565662 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
USB1-211ENST00000565662 IGLV2-18A0A075B6J9 118 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 M0R2N4 97 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 ARL14EPLP0DKL9 152 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 ZFP69Q49AA0 526 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 Q8TAT8 98 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
USB1-211ENST00000565662 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
USB1-211ENST00000565662 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
USB1-211ENST00000565662 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
USB1-211ENST00000565662 OR2T35Q8NGX2 323 aa11.68□□□□□ -0.54
USB1-211ENST00000565662 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
USB1-211ENST00000565662 PRO0255Q9UI72 69 aa11.68□□□□□ -0.54
USB1-211ENST00000565662 FXYD6-FXYD2A0A087WZ82 144 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 RAB24Q969Q5 203 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 MRPS16Q9Y3D3 137 aaKnown RBP11.67□□□□□ -0.54
USB1-211ENST00000565662 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 ICOSQ9Y6W8 199 aa11.67□□□□□ -0.54
USB1-211ENST00000565662 RTL8CO15255 209 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 CIDEAO60543 219 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 HOXA5P20719 270 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 PRR9Q5T870 116 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 SDF2L1Q9HCN8 221 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 RPH3ALQ9UNE2 315 aa11.66□□□□□ -0.54
USB1-211ENST00000565662 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 ORM1P02763 201 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 GCHFRP30047 84 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 PPT1P50897 306 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 C6orf223Q8N319 242 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 RASL10AQ92737 203 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 MUC4Q99102 2169 aa11.65□□□□□ -0.54
USB1-211ENST00000565662 A0A0J9YY99 117 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 K7EP13 123 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 PAX4O43316 350 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 TCRAP04437 139 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
USB1-211ENST00000565662 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 IQCF2Q8IXL9 164 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 CYB561D1Q8N8Q1 229 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
USB1-211ENST00000565662 TCEAL7Q9BRU2 100 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 Q9H8V8 135 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 DNAH10Q8IVF4 4471 aa11.64□□□□□ -0.55
USB1-211ENST00000565662 A0A1B0GVY2 172 aa11.63□□□□□ -0.55
USB1-211ENST00000565662 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
USB1-211ENST00000565662 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
USB1-211ENST00000565662 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 TRGV4A0A0C4DH28 118 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 M0R2P5 195 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 ZNF345Q14585 488 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 MRPL16Q9NX20 251 aaKnown RBP11.62□□□□□ -0.55
USB1-211ENST00000565662 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
USB1-211ENST00000565662 A0A096LPF7 62 aa11.61□□□□□ -0.55
USB1-211ENST00000565662 C9JCJ5 164 aa11.61□□□□□ -0.55
USB1-211ENST00000565662 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
USB1-211ENST00000565662 SMUG1Q53HV7 270 aa11.61□□□□□ -0.55
USB1-211ENST00000565662 RPL7L1Q6DKI1 246 aaKnown RBP11.61□□□□□ -0.55
USB1-211ENST00000565662 STOML3Q8TAV4 291 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms