RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PFDN5Q99471 154 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 CALML5Q9NZT1 146 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 COPZ2Q9P299 210 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 HSPB8Q9UJY1 196 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 HIGD1AQ9Y241 93 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 TPRKBQ9Y3C4 175 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 TECPR2O15040 1411 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 MAGI1Q96QZ7 1491 aaPredicted RBP0.79□□□□□ -2.28
LINC00557-201ENST00000563184 MAPKBP1O60336 1514 aa0.79□□□□□ -2.28
LINC00557-201ENST00000563184 WDR97A6NE52 1622 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 TOP2BQ02880 1626 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 LOC107984640A0A0U1RRK4 108 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 PNMA8CA0A1B0GUJ8 204 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 LOC107986453A0A1B0GWG9 222 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 ARPC5O15511 151 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 OR2H2O95918 312 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 TRACP01848 142 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 FABP4P15090 132 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 HIST1H1BP16401 226 aaKnown RBP0.78□□□□□ -2.28
LINC00557-201ENST00000563184 ETV6P41212 452 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 DNAJB13P59910 316 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 QRFPP83859 136 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 HRCT1Q6UXD1 115 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 MORN4Q8NDC4 146 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 CCL4L1Q8NHW4 92 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 PSMF1Q92530 271 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 AP1S3Q96PC3 154 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 OR4C12Q96R67 309 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 TPT1P8Q9HAU6 139 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 CBLN4Q9NTU7 201 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 ARHGEF10O15013 1369 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 KIAA1107Q9UPP5 1409 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 ZCCHC6Q5VYS8 1495 aaKnown RBP0.78□□□□□ -2.28
LINC00557-201ENST00000563184 TEX14Q8IWB6 1497 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 ZNF462Q96JM2 2506 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 CLASP1Q7Z460 1538 aa0.78□□□□□ -2.28
LINC00557-201ENST00000563184 A0A096LPI6 279 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 M0R2Z0 102 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 TPST1O60507 370 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 SULT1C4O75897 302 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 NCR2O95944 276 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 IGHV3-33P01772 117 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 HBDP02042 147 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 COX4I1P13073 169 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 CRYGSP22914 178 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 FOXA3P55318 350 aaPredicted RBP0.77□□□□□ -2.29
LINC00557-201ENST00000563184 MAXP61244 160 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 SMIM21Q3B7S5 101 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 TMEM244Q5VVB8 128 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 OR5AK2Q8NH90 309 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 C1orf54Q8WWF1 131 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 CST11Q9H112 138 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 SAR1AQ9NR31 198 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 MPC1Q9Y5U8 109 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 OVOS2A0A0G2JMS6 1433 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 SOGA1O94964 1423 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 PTPRMP28827 1452 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 URB2Q14146 1524 aaKnown RBP0.77□□□□□ -2.29
LINC00557-201ENST00000563184 KIAA0586Q9BVV6 1533 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 SYNJ1O43426 1573 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 GLI2P10070 1586 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 FRMPD1Q5SYB0 1578 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 MYH3P11055 1940 aa0.77□□□□□ -2.29
LINC00557-201ENST00000563184 MUC4Q99102 2169 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 PIK3C2AO00443 1686 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 MROH2BQ7Z745 1585 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 MAGI3Q5TCQ9 1506 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 UHRF1BP1LA0JNW5 1464 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 CDK12Q9NYV4 1490 aaPredicted RBP0.76□□□□□ -2.29
LINC00557-201ENST00000563184 DISP2A7MBM2 1401 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 PRG4Q92954 1404 aaPredicted RBP0.76□□□□□ -2.29
LINC00557-201ENST00000563184 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 C9orf170A2RU37 121 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 IFITM5A6NNB3 132 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 C5orf67F2Z3F1 127 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 IGLV3-1P01715 115 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 TSPAN19P0C672 248 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 CCL4P13236 92 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 HLA-DRB4P13762 266 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 NCS1P62166 190 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 BLCAPP62952 87 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 SELENOWP63302 87 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 DIAPH2-AS1Q14236 149 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 LINC00575Q6W349 94 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 TMEM91Q6ZNR0 172 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 CIB3Q96Q77 187 aaPredicted RBP0.76□□□□□ -2.29
LINC00557-201ENST00000563184 TSC22D3Q99576 134 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 HLA-DRB4X5D2U9 266 aa0.76□□□□□ -2.29
LINC00557-201ENST00000563184 ADGBQ8N7X0 1667 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 EPRSP07814 1512 aaKnown RBP0.75□□□□□ -2.29
LINC00557-201ENST00000563184 ABCC2Q92887 1545 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 MAGI2Q86UL8 1455 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 PTPRGP23470 1445 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 FAM135BQ49AJ0 1406 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 CPDO75976 1380 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 ZNF727A8MUV8 499 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 JMJD7-PLA2G4BH0Y9G9 81 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 PPYP01298 95 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 RBP4P02753 201 aa0.75□□□□□ -2.29
LINC00557-201ENST00000563184 SLC25A4P12235 298 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms