RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MARVELD1Q9BSK0 173 aa9.79□□□□□ -0.84
SNX6-210ENST00000557341 TP53TG3Q9ULZ0 132 aa9.79□□□□□ -0.84
SNX6-210ENST00000557341 HSPB11Q9Y547 144 aa9.79□□□□□ -0.84
SNX6-210ENST00000557341 SSNA1O43805 119 aa9.78□□□□□ -0.84
SNX6-210ENST00000557341 MPC2O95563 127 aa9.78□□□□□ -0.84
SNX6-210ENST00000557341 TAS2R45P59539 299 aa9.78□□□□□ -0.84
SNX6-210ENST00000557341 FFAR4Q5NUL3 377 aa9.78□□□□□ -0.84
SNX6-210ENST00000557341 MRPL16Q9NX20 251 aaKnown RBP9.78□□□□□ -0.84
SNX6-210ENST00000557341 HSPG2P98160 4391 aa9.78□□□□□ -0.84
SNX6-210ENST00000557341 IFNA5P01569 189 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
SNX6-210ENST00000557341 DEFA1P59665 94 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 DEFA3P59666 94 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 RANP62826 216 aaKnown RBP9.77□□□□□ -0.85
SNX6-210ENST00000557341 Q6ZQT7 251 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 SCGB1C1Q8TD33 95 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 ICOSQ9Y6W8 199 aa9.77□□□□□ -0.85
SNX6-210ENST00000557341 PAX4O43316 350 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 IGHV3-53P01767 116 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 RPL12P30050 165 aaKnown RBP9.76□□□□□ -0.85
SNX6-210ENST00000557341 ZNF266Q14584 549 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 SMIM3Q9BZL3 60 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 PRO0255Q9UI72 69 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
SNX6-210ENST00000557341 A6NHS1 94 aa9.75□□□□□ -0.85
SNX6-210ENST00000557341 SLAQ13239 276 aa9.75□□□□□ -0.85
SNX6-210ENST00000557341 MUC21Q5SSG8 566 aa9.75□□□□□ -0.85
SNX6-210ENST00000557341 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
SNX6-210ENST00000557341 MBD2Q9UBB5 411 aa9.75□□□□□ -0.85
SNX6-210ENST00000557341 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
SNX6-210ENST00000557341 SIVA1O15304 175 aa9.74□□□□□ -0.85
SNX6-210ENST00000557341 FAM74A1Q5RGS3 127 aa9.74□□□□□ -0.85
SNX6-210ENST00000557341 Q6AWC8 147 aa9.74□□□□□ -0.85
SNX6-210ENST00000557341 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 CRYBA4P53673 196 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 LINC00315P59091 139 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 CMTM2Q8TAZ6 248 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 TMED6Q8WW62 240 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 OTORQ9NRC9 128 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 RPH3ALQ9UNE2 315 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 HHLA3Q9XRX5 114 aa9.73□□□□□ -0.85
SNX6-210ENST00000557341 TRGV4A0A0C4DH28 118 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 NXPH4O95158 308 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 FHL2Q14192 279 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
SNX6-210ENST00000557341 TMEM183BQ1AE95 376 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 ACOT6Q3I5F7 207 aaPredicted RBP9.72□□□□□ -0.85
SNX6-210ENST00000557341 TMEM183AQ8IXX5 376 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 C8orf49Q96NF6 230 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 SPXQ9BT56 116 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
SNX6-210ENST00000557341 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.85
SNX6-210ENST00000557341 A0A1W2PPV4 95 aa9.71□□□□□ -0.86
SNX6-210ENST00000557341 EIF3GO75821 320 aaKnown RBP eCLIP9.71□□□□□ -0.86
SNX6-210ENST00000557341 OR10G4Q8NGN3 311 aa9.71□□□□□ -0.86
SNX6-210ENST00000557341 NAGKQ9UJ70 344 aa9.71□□□□□ -0.86
SNX6-210ENST00000557341 PGPA6NDG6 321 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 SFTA3P0C7M3 94 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 SRIP30626 198 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 RAB2AP61019 212 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 TDRG1Q3Y452 100 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
SNX6-210ENST00000557341 GOLT1AQ6ZVE7 132 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 NEGR1Q7Z3B1 354 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 ARL6IP6Q8N6S5 226 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 PCNPQ8WW12 178 aaKnown RBP9.7□□□□□ -0.86
SNX6-210ENST00000557341 RASL10AQ92737 203 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 WFDC1Q9HC57 220 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
SNX6-210ENST00000557341 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
SNX6-210ENST00000557341 LYPD5Q6UWN5 251 aa9.69□□□□□ -0.86
SNX6-210ENST00000557341 IQCF2Q8IXL9 164 aa9.69□□□□□ -0.86
SNX6-210ENST00000557341 ZNF479Q96JC4 524 aa9.69□□□□□ -0.86
SNX6-210ENST00000557341 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 TRAV21A0A0B4J279 112 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 F6UZH7 168 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 K7EQD1 137 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 ORM1P02763 201 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 CDC34P49427 236 aaPredicted RBP9.68□□□□□ -0.86
SNX6-210ENST00000557341 OR10G9Q8NGN4 311 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 OR10G7Q8NGN6 311 aa9.68□□□□□ -0.86
SNX6-210ENST00000557341 TRAV8-1A0A0A6YYK1 113 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 C9JCJ5 164 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 M0R2P5 195 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 HMGB3O15347 200 aaKnown RBP9.67□□□□□ -0.86
SNX6-210ENST00000557341 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 GYPEP15421 78 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 GNG5P63218 68 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 TXNDC17Q9BRA2 123 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 NDFIP1Q9BT67 221 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
SNX6-210ENST00000557341 TREM1Q9NP99 234 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms