RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	ZNF324	O75467	553 aa	Predicted RBP	6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	IGLV2-11	P01706	119 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	SLC25A5	P05141	298 aa	Known RBP	6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	ZNF138	P52744	262 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	C12orf74	Q32Q52	190 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	CMTM2	Q8TAZ6	248 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	RXFP4	Q8TDU9	374 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	MBD3L1	Q8WWY6	194 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	NEU1	Q99519	415 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	C11orf68	Q9H3H3	251 aa	Known RBP	6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	TMEM167B	Q9NRX6	74 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	EPDR1	Q9UM22	224 aa		6.3	□□□□□ -1.4
PRKCH-222	ENST00000556778	SACS	Q9NZJ4	4579 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	TRAV34	A0A0B4J273	112 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	FAM74A7	A6NL05	159 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	HBE1	P02100	147 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	AMBP	P02760	352 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	TCRA	P04437	139 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	GPX1	P07203	203 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	TSPO	P30536	169 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	LEP	P41159	167 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	ATP5G3	P48201	142 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	RRN3P1	Q2M238	152 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	TMEM78	Q5T7P6	136 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	FAM222A	Q5U5X8	452 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778		Q6ZTC4	211 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	TP53TG3	Q9ULZ0	132 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778	AGRN	O00468	2067 aa		6.29	□□□□□ -1.4
PRKCH-222	ENST00000556778		A0A1W2PRE2	83 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	C7orf71	A4D174	169 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	RBAKDN	A6NC62	111 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	SMIM9	A6NGZ8	99 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	UMAD1	C9J7I0	102 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778		F6UZH7	168 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	PAGE4	O60829	102 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	CRISP2	P16562	243 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	ZNF80	P51504	273 aa	Predicted RBP	6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	TAS2R60	P59551	318 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	SLC51B	Q86UW2	128 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	CCDC28A	Q8IWP9	274 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	C8orf49	Q96NF6	230 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	ODF3	Q96PU9	254 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	DKK2	Q9UBU2	259 aa		6.28	□□□□□ -1.4
PRKCH-222	ENST00000556778	DNAH1	Q9P2D7	4330 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778		H7BYZ3	331 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	IFNA7	P01567	189 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	SULT1A2	P50226	295 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	EIF5A	P63241	154 aa	Known RBP	6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	MUC21	Q5SSG8	566 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	CST9LP1	Q5W188	147 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	ALKAL2	Q6UX46	152 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	PRNT	Q86SH4	94 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	C5orf17	Q8NAS9	161 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	PSG8	Q9UQ74	426 aa		6.27	□□□□□ -1.41
PRKCH-222	ENST00000556778	RYR2	Q92736	4967 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	GNRH2	O43555	120 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	SPART-AS1	P0CW21	52 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	DEFB130B	P0DP73	79 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	DEFB130A	P0DP74	79 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	DPPA3	Q6W0C5	159 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	RNASE8	Q8TDE3	154 aa	Known RBP	6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	NIPSNAP3B	Q9BS92	247 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	TREM1	Q9NP99	234 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	NOP10	Q9NPE3	64 aa	Known RBP	6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	GSN-AS1	Q9NRJ2	163 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	C11orf21	Q9P2W6	132 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	KLF12	Q9Y4X4	402 aa		6.26	□□□□□ -1.41
PRKCH-222	ENST00000556778	CBY3	A6NI87	242 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	PEX7	O00628	323 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	NMB	P08949	121 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	LINC00310	P59036	64 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	FLI1	Q01543	452 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM256	Q8N2U0	113 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	CYB561D1	Q8N8Q1	229 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM75	Q8N9X5	138 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	C11orf72	Q8NBR9	251 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	PCNP	Q8WW12	178 aa	Known RBP	6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	ATG101	Q9BSB4	218 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	MDFIC	Q9P1T7	246 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	GNG13	Q9P2W3	67 aa		6.25	□□□□□ -1.41
PRKCH-222	ENST00000556778	HYDIN	Q4G0P3	5121 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	IGHV1OR15-1	A0A075B7D0	117 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	TRAV1-1	A0A0B4J248	108 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	TMEM189	A5PLL7	270 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	IGLL5	B9A064	214 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	HTN3	P15516	51 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	CRIP1	P50238	77 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	CTAG1A	P78358	180 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	ANXA2R	Q3ZCQ2	193 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778		Q6AWC8	147 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	EIF5AL1	Q6IS14	154 aa	Known RBP	6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	C20orf144	Q9BQM9	153 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	PYGO2	Q9BRQ0	406 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	NAGK	Q9UJ70	344 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	ARL2-SNX15	V9GYD0	113 aa		6.24	□□□□□ -1.41
PRKCH-222	ENST00000556778	ALMS1	Q8TCU4	4167 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	TENM2	Q9NT68	2774 aa		6.23	□□□□□ -1.41
PRKCH-222	ENST00000556778	DEFB131B	A0A096LNP1	70 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms