RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 JKAMPQ9P055 326 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 M0R381 172 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 IGHG4P01861 327 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 CTSGP08311 255 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 RPL11P62913 178 aaKnown RBP13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 DTX2Q86UW9 622 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 TMEM219Q86XT9 240 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 HOXB4P17483 251 aaPredicted RBP13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 A0A1W2PPM0 123 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 PPBPP02775 128 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 FABP2P12104 132 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 IGFL3Q6UXB1 125 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 ZFYVE26Q68DK2 2539 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 ITPR1Q14643 2758 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 H3BMG7 143 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 K7EP34 96 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 HSD52Q0P140 79 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 WFDC2Q14508 124 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 RNF185Q96GF1 192 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 KAAG1Q9UBP8 84 aa13.22□□□□□ -0.29
PPP4R3A-208ENST00000555462 H3BVH4 76 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 SRD5A1P18405 259 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 LGALS9BQ3B8N2 356 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 LGALS9CQ6DKI2 356 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 CHAC1Q9BUX1 264 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 MYO18BQ8IUG5 2567 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 FLNCQ14315 2725 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 H3BRM9 83 aa13.21□□□□□ -0.29
PPP4R3A-208ENST00000555462 SMIM13P0DJ93 91 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 FOXC1Q12948 553 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 ZNF562Q6V9R5 426 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 ZNF575Q86XF7 245 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 RPL7P18124 248 aaKnown RBP13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 TRBV25-1A0A075B6N4 114 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 SMIM17P0DL12 118 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 ACACBO00763 2458 aa13.2□□□□□ -0.3
PPP4R3A-208ENST00000555462 SONP18583 2426 aaKnown RBP13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 ODF1Q14990 250 aa13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 UFSP1Q6NVU6 142 aa13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 B9A039 149 aa13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 ETDBQ3ZM63 59 aa13.19□□□□□ -0.3
PPP4R3A-208ENST00000555462 IGKV3D-20A0A0C4DH25 116 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 PAX2Q02962 417 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 IGLV11-55A0A075B6I3 123 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 FABP5P3A8MUU1 101 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 IGKCP01834 107 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 ZNF493Q6ZR52 646 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
PPP4R3A-208ENST00000555462 INSL3P51460 131 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 HIST1H4GQ99525 98 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 CYSLTR1Q9Y271 337 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 F6UB75 175 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 ZFP36P26651 326 aaKnown RBP13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 ARL6IP6Q8N6S5 226 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 MGPP08493 103 aa13.17□□□□□ -0.3
PPP4R3A-208ENST00000555462 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
PPP4R3A-208ENST00000555462 BMI1P35226 326 aa13.16□□□□□ -0.3
PPP4R3A-208ENST00000555462 Q6AWC8 147 aa13.16□□□□□ -0.3
PPP4R3A-208ENST00000555462 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
PPP4R3A-208ENST00000555462 G3V4G9 280 aa13.15□□□□□ -0.3
PPP4R3A-208ENST00000555462 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
PPP4R3A-208ENST00000555462 RPL39LQ96EH5 51 aaKnown RBP13.15□□□□□ -0.3
PPP4R3A-208ENST00000555462 UBTD1Q9HAC8 227 aa13.15□□□□□ -0.31
PPP4R3A-208ENST00000555462 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 Q5PR19 223 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 C14orf178Q8N769 122 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 RAB1BQ9H0U4 201 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 PAX8Q06710 450 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 SCGB2A2Q13296 93 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 LYPD1Q8N2G4 141 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 TNFRSF14Q92956 283 aa13.14□□□□□ -0.31
PPP4R3A-208ENST00000555462 OR4X2Q8NGF9 303 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 U3KQK5 164 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 PRR9Q5T870 116 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 A0A1B0GW15 77 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 CEACAM3P40198 252 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
PPP4R3A-208ENST00000555462 DPM2O94777 84 aa13.12□□□□□ -0.31
PPP4R3A-208ENST00000555462 ARL3P36405 182 aa13.12□□□□□ -0.31
PPP4R3A-208ENST00000555462 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
PPP4R3A-208ENST00000555462 S100A4P26447 101 aaKnown RBP13.12□□□□□ -0.31
PPP4R3A-208ENST00000555462 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
PPP4R3A-208ENST00000555462 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms