RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 A0A1B0GW15 77 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 PF4P02776 101 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 MED14OSP0DP75 135 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 OR5I1Q13606 314 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 IGFL4Q6B9Z1 124 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 ZNF575Q86XF7 245 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 C11orf44Q8N8P7 122 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 GATD1Q8NB37 220 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 DAZAP1Q96EP5 407 aaKnown RBP8.09□□□□□ -1.11
PABPN1-203ENST00000553960 DUX3Q96PT4 197 aa8.09□□□□□ -1.11
PABPN1-203ENST00000553960 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 H3BMM0 161 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 MGST1P10620 155 aaKnown RBP8.08□□□□□ -1.12
PABPN1-203ENST00000553960 RAB5AP20339 215 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 LEPP41159 167 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
PABPN1-203ENST00000553960 NSUN5P1Q3KNT7 163 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 FAM24BQ8N5W8 94 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
PABPN1-203ENST00000553960 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
PABPN1-203ENST00000553960 SRD5A3Q9H8P0 318 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 MAP6D1Q9H9H5 199 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 NAT8BQ9UHF3 227 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
PABPN1-203ENST00000553960 NOTCH3Q9UM47 2321 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 ZNF705GA8MUZ8 300 aaPredicted RBP8.07□□□□□ -1.12
PABPN1-203ENST00000553960 F2Z2F3 143 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 SH2D1AO60880 128 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 MT-ND6P03923 174 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 CTRLP40313 264 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 ODF3L2Q3SX64 289 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 PSMG4Q5JS54 123 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 FAM210BQ96KR6 192 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 AURKAIP1Q9NWT8 199 aaPredicted RBP8.07□□□□□ -1.12
PABPN1-203ENST00000553960 RPH3ALQ9UNE2 315 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 VWFP04275 2813 aa8.07□□□□□ -1.12
PABPN1-203ENST00000553960 IGHV4-4A0A075B6R2 117 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 A0A1B0GXF2 115 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 PHOX2AO14813 284 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
PABPN1-203ENST00000553960 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 CDKN1BP46527 198 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 ZNF80P51504 273 aaPredicted RBP8.06□□□□□ -1.12
PABPN1-203ENST00000553960 ERCC8Q13216 396 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 C8orf49Q96NF6 230 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 GNB1LQ9BYB4 327 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 ZMAT5Q9UDW3 170 aaKnown RBP8.06□□□□□ -1.12
PABPN1-203ENST00000553960 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
PABPN1-203ENST00000553960 STAB1Q9NY15 2570 aa8.06□□□□□ -1.12
PABPN1-203ENST00000553960 SAP30O75446 220 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 PIK3CD-AS1Q5SR53 167 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 TRPT1Q86TN4 253 aaKnown RBP8.05□□□□□ -1.12
PABPN1-203ENST00000553960 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 NUP35Q8NFH5 326 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 Q8TAT8 98 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 PTH2Q96A98 100 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 KCNS1Q96KK3 526 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 SGK494Q96LW2 274 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 NEU1Q99519 415 aa8.05□□□□□ -1.12
PABPN1-203ENST00000553960 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 SNAI2O43623 268 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 S100A8P05109 93 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 DEFB131AP59861 70 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 OR2D3Q8NGH3 330 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 SCRT2Q9NQ03 307 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 AGRNO00468 2067 aa8.04□□□□□ -1.12
PABPN1-203ENST00000553960 IGKV3D-20A0A0C4DH25 116 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 C7orf71A4D174 169 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 TMEM189A5PLL7 270 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 HLA-DQA1P01909 254 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 GPX1P07203 203 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 GDF5OSQ5U4N7 250 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 PRR27Q6MZM9 219 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
PABPN1-203ENST00000553960 FRZBQ92765 325 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 NDUFAF3Q9BU61 184 aa8.03□□□□□ -1.12
PABPN1-203ENST00000553960 IGKV3-7A0A075B6H7 116 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 A0A1B0GUT8 65 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 F6UB75 175 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 CRXO43186 299 aaPredicted RBP8.02□□□□□ -1.13
PABPN1-203ENST00000553960 NXPH4O95158 308 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 NUTF2P61970 127 aaKnown RBP8.02□□□□□ -1.13
PABPN1-203ENST00000553960 EGFEM1PQ0D2K5 195 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 PRR9Q5T870 116 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 WFDC3Q8IUB2 231 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 TMEM256Q8N2U0 113 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 C3orf56Q8N813 242 aa8.02□□□□□ -1.13
PABPN1-203ENST00000553960 C11orf21Q9P2W6 132 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms