RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 OR1N2Q8NGR9 330 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 GLMPQ8WWB7 406 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 DERL1Q9BUN8 251 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 RHPN1-AS1Q9BWJ2 59 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 PSG8Q9UQ74 426 aa5.35□□□□□ -1.55
DEPDC4-208ENST00000549341 IGHV3-49A0A0A0MS15 119 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 TRAV34A0A0B4J273 112 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 XKRY2A2RUG3 117 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 A8MWP6 167 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 C1orf196B1AJZ1 125 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 OVOL1O14753 267 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 CHEK1O14757 476 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 GATCO43716 136 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 RAB5BP61020 215 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 COX19Q49B96 90 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 TMEM78Q5T7P6 136 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 LCN12Q6JVE5 192 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 UNQ9165/PRO28630Q6UXU0 137 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 TCF24Q7RTU0 167 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 PRNTQ86SH4 94 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 Q86TA4 180 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 TMEM183AQ8IXX5 376 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 GBGT1Q8N5D6 347 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 FAM24BQ8N5W8 94 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 OR4B1Q8NGF8 309 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 IGF2BP2-AS1Q96M15 143 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 C17orf77Q96MU5 243 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 NRN1Q9NPD7 142 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 MLXQ9UH92 298 aa5.34□□□□□ -1.55
DEPDC4-208ENST00000549341 DNAH10Q8IVF4 4471 aa5.34□□□□□ -1.56
DEPDC4-208ENST00000549341 TRBV24-1A0A075B6N3 115 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 IGHV4OR15-8A0A075B7B6 117 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 IGHV3OR16-13A0A075B7E8 117 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 A0A087WW49 117 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 IGHV3-74A0A0B4J1X5 117 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 ZNF705GA8MUZ8 300 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 SLC17A3O00476 420 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 LY6G6CO95867 125 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 LTAP01374 205 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 P01737 135 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 RAB5AP20339 215 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 TM4SF20Q53R12 229 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 PRR27Q6MZM9 219 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 ZNF738Q8NE65 137 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 OR11H1Q8NG94 326 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 OR10J6PQ8NGY7 276 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 FAM210BQ96KR6 192 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 TM2D3Q9BRN9 247 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 IL36BQ9NZH7 164 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 ZNF492Q9P255 531 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 TMA7Q9Y2S6 64 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 URGCP-MRPS24S4R325 110 aa5.33□□□□□ -1.56
DEPDC4-208ENST00000549341 TRBV20OR9-2A0A075B6H5 130 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 COLCA2A8K830 154 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 A8MWL6 223 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 M0R3E3 92 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 SAP30O75446 220 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 APOHP02749 345 aaPredicted RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 FOLR2P14207 255 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 RPS10P46783 165 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 RPS20P60866 119 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 OR5I1Q13606 314 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 KLF5Q13887 457 aaPredicted RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 ELOBQ15370 118 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 SMUG1Q53HV7 270 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 CT83Q5H943 113 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 RBPMS2Q6ZRY4 209 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 LINC00477Q96M19 166 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 LINC00479Q96M42 142 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 SAV1Q9H4B6 383 aaPredicted RBP5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 LENEPQ9Y5L5 61 aa5.32□□□□□ -1.56
DEPDC4-208ENST00000549341 TRAV2A0A0B4J234 112 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 A0A1W2PPQ1 181 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 TMEM213A2RRL7 107 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 C2orf70A6NJV1 201 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 K7EN84 100 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 S100A6P06703 90 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 PFN1P07737 140 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 CBLN1P23435 193 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 ZNF138P52744 262 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 FAM3BP58499 235 aaPredicted RBP5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 OR9G4Q8NGQ1 327 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 FAM110AQ9BQ89 295 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 SPATA25Q9BR10 227 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 MLST8Q9BVC4 326 aa5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-208ENST00000549341 SRD5A3Q9H8P0 318 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 258.8 ms