RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 RIF1Q5UIP0 2472 aaKnown RBP10.97□□□□□ -0.65
SRP54-202ENST00000546080 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 OR11H12B2RN74 326 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 B9A039 149 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 ZNF672Q499Z4 452 aaPredicted RBP10.96□□□□□ -0.65
SRP54-202ENST00000546080 RNF182Q8N6D2 247 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 OR11H2Q8NH07 326 aa10.96□□□□□ -0.65
SRP54-202ENST00000546080 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.66
SRP54-202ENST00000546080 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.66
SRP54-202ENST00000546080 RBAKDNA6NC62 111 aa10.96□□□□□ -0.66
SRP54-202ENST00000546080 H7C1H1 209 aa10.96□□□□□ -0.66
SRP54-202ENST00000546080 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
SRP54-202ENST00000546080 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
SRP54-202ENST00000546080 F8VRH5 84 aa10.95□□□□□ -0.66
SRP54-202ENST00000546080 LINC01619G3V211 115 aa10.95□□□□□ -0.66
SRP54-202ENST00000546080 C11orf21Q9P2W6 132 aa10.95□□□□□ -0.66
SRP54-202ENST00000546080 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 APOMO95445 188 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 INSL3P51460 131 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 KLRD1Q13241 179 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 OR11H6Q8NGC7 330 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 OTOGLQ3ZCN5 2332 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 RAB9AP51151 201 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 SLC50A1Q9BRV3 221 aa10.94□□□□□ -0.66
SRP54-202ENST00000546080 HOXA3O43365 443 aaPredicted RBP10.93□□□□□ -0.66
SRP54-202ENST00000546080 CKS1BP61024 79 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 ATP5G2Q06055 141 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 TCTEX1D4Q5JR98 221 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 LY6G5BQ8NDX9 201 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 CYSLTR1Q9Y271 337 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 KALRNO60229 2985 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 TCF15Q12870 199 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 TMEM78Q5T7P6 136 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 AGPAT4-IT1Q9H0P7 198 aa10.93□□□□□ -0.66
SRP54-202ENST00000546080 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 LCNL1Q6ZST4 164 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 SMIM2Q9BVW6 85 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 ROS1P08922 2347 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 IGHV3-66A0A0C4DH42 116 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 CD3EP07766 207 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 MORN3Q6PF18 240 aaPredicted RBP10.92□□□□□ -0.66
SRP54-202ENST00000546080 MRAP2Q96G30 205 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 KLK15Q9H2R5 256 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
SRP54-202ENST00000546080 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
SRP54-202ENST00000546080 BUB3O43684 328 aa10.91□□□□□ -0.66
SRP54-202ENST00000546080 LGALS1P09382 135 aaKnown RBP10.91□□□□□ -0.66
SRP54-202ENST00000546080 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
SRP54-202ENST00000546080 IGF2-ASQ6U949 168 aa10.91□□□□□ -0.66
SRP54-202ENST00000546080 C1QTNF4Q9BXJ3 329 aa10.91□□□□□ -0.66
SRP54-202ENST00000546080 PKDREJQ9NTG1 2253 aa10.91□□□□□ -0.66
SRP54-202ENST00000546080 TMEM238LA0A1B0GVL6 79 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 A6NJY4 79 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 ODF3BA8MYP8 253 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 FOXI1Q12951 378 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 DLX4Q92988 240 aaPredicted RBP10.9□□□□□ -0.66
SRP54-202ENST00000546080 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 IGHV4-4A0A075B6R2 117 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.9□□□□□ -0.66
SRP54-202ENST00000546080 ATP6V0E2Q8NHE4 81 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 CLUHP3Q96NS8 147 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
SRP54-202ENST00000546080 H3BVH4 76 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 SLC25A16P16260 332 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 TOMM6Q96B49 74 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 SYT8Q8NBV8 401 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 NEXN-AS1Q8NBZ9 246 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 PRADC1Q9BSG0 188 aa10.89□□□□□ -0.67
SRP54-202ENST00000546080 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 M0R1W7 72 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 C15orf32Q32M92 178 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 GVINP1Q7Z2Y8 2422 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 AGRNO00468 2067 aa10.88□□□□□ -0.67
SRP54-202ENST00000546080 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 IGHV7-81A0A0B4J1V7 117 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
SRP54-202ENST00000546080 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
SRP54-202ENST00000546080 PTPRZ1P23471 2315 aaPredicted RBP10.87□□□□□ -0.67
SRP54-202ENST00000546080 CLEC3BP05452 202 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 PRTN3P24158 256 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 PSMB2P49721 201 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 Q5PR19 223 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 Q6ZQT7 251 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 Q8N6K4 173 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 HIF1ANQ9NWT6 349 aa10.87□□□□□ -0.67
SRP54-202ENST00000546080 MSRB2Q9Y3D2 182 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms