RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 PIFOQ8TCI5 191 aa17.92■□□□□ 0.46
FOXA1-202ENST00000545425 SIVA1O15304 175 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 NUDT3O95989 172 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 MPV17L2Q567V2 206 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 TMEM78Q5T7P6 136 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 C9orf47Q6ZRZ4 202 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 A0A1W2PPR1 153 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 CD5LO43866 347 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 NRGNQ92686 78 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 IFI27L1Q96BM0 104 aa17.91■□□□□ 0.46
FOXA1-202ENST00000545425 SEC11AP67812 179 aa17.9■□□□□ 0.46
FOXA1-202ENST00000545425 CLEC19AQ6UXS0 136 aa17.9■□□□□ 0.46
FOXA1-202ENST00000545425 SMIM15Q7Z3B0 74 aa17.9■□□□□ 0.46
FOXA1-202ENST00000545425 LOC389332A0A1B0GUA5 103 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 H3BUA1 57 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 NPYP01303 97 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 CACNG7P62955 275 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 C19orf54Q5BKX5 351 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 OR9G4Q8NGQ1 327 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 RNF185Q96GF1 192 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 ARHGAP32A7KAX9 2087 aa17.89■□□□□ 0.45
FOXA1-202ENST00000545425 PRSS47A8MTI9 375 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 C9orf139Q6ZV77 190 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 OR8A1Q8NGG7 326 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 BPESC1Q9GZL8 116 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 IGHV4-4A0A075B6R2 117 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 HLA-DMBP28068 263 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 ZNF575Q86XF7 245 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 ABCA4P78363 2273 aa17.88■□□□□ 0.45
FOXA1-202ENST00000545425 H0Y8G0 127 aa17.87■□□□□ 0.45
FOXA1-202ENST00000545425 FCER1GP30273 86 aa17.87■□□□□ 0.45
FOXA1-202ENST00000545425 TRAV41A0A0B4J266 112 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 NDUFS7O75251 213 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 LOXL1Q08397 574 aaPredicted RBP17.86■□□□□ 0.45
FOXA1-202ENST00000545425 C8orf86Q6ZUL3 223 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 FOXC2Q99958 501 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 AGPAT4-IT1Q9H0P7 198 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 SMPXQ9UHP9 88 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 CBY1Q9Y3M2 126 aa17.86■□□□□ 0.45
FOXA1-202ENST00000545425 TIMM8BQ9Y5J9 83 aaPredicted RBP17.86■□□□□ 0.45
FOXA1-202ENST00000545425 NCR2O95944 276 aa17.85■□□□□ 0.45
FOXA1-202ENST00000545425 FAM106AQ4KMX7 169 aa17.85■□□□□ 0.45
FOXA1-202ENST00000545425 MEGF9Q9H1U4 602 aa17.85■□□□□ 0.45
FOXA1-202ENST00000545425 TRAV8-2A0A0B4J237 113 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 PRAC2D3DTV9 90 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 ERCC8Q13216 396 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 IL17RELQ6ZVW7 336 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 BOD1L2Q8IYS8 172 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 G3V318 75 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 TAX1BP3O14907 124 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 CCL25O15444 150 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 IGFL4Q6B9Z1 124 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 Q8N8P6 123 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 OR4X2Q8NGF9 303 aa17.84■□□□□ 0.45
FOXA1-202ENST00000545425 IGHV1-69DA0A0B4J2H0 117 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 K7EP13 123 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 SNAI2O43623 268 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 TNFRSF6BO95407 300 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 IGHV1-69P01742 117 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 USMG5Q96IX5 58 aa17.83■□□□□ 0.44
FOXA1-202ENST00000545425 NDUFS8O00217 210 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 NDUFA4O00483 81 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 IGF1P05019 195 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 FGF6P10767 208 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 PRSS57Q6UWY2 283 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 C2orf91Q6ZV80 131 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 GLMPQ8WWB7 406 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 LINC00477Q96M19 166 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 IGHV3-35A0A0C4DH35 117 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 ATP5LO75964 103 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 TMEM97Q5BJF2 176 aa17.82■□□□□ 0.44
FOXA1-202ENST00000545425 HRNRQ86YZ3 2850 aaPredicted RBP17.81■□□□□ 0.44
FOXA1-202ENST00000545425 IGKV3D-20A0A0C4DH25 116 aa17.81■□□□□ 0.44
FOXA1-202ENST00000545425 TRBV7-9A0A0J9YWB2 115 aa17.81■□□□□ 0.44
FOXA1-202ENST00000545425 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
FOXA1-202ENST00000545425 VAMP3Q15836 100 aa17.81■□□□□ 0.44
FOXA1-202ENST00000545425 RNF182Q8N6D2 247 aa17.81■□□□□ 0.44
FOXA1-202ENST00000545425 MUC21A0A0G2JKD1 596 aa17.8■□□□□ 0.44
FOXA1-202ENST00000545425 MUC21A0A140T8X8 626 aa17.8■□□□□ 0.44
FOXA1-202ENST00000545425 OVOL1O14753 267 aa17.8■□□□□ 0.44
FOXA1-202ENST00000545425 MUC21Q5SSG8 566 aa17.8■□□□□ 0.44
FOXA1-202ENST00000545425 PIMREGQ9BSJ6 248 aa17.8■□□□□ 0.44
FOXA1-202ENST00000545425 MCRIP2Q9BUT9 160 aaKnown RBP17.8■□□□□ 0.44
FOXA1-202ENST00000545425 PEF1Q9UBV8 284 aaKnown RBP17.8■□□□□ 0.44
FOXA1-202ENST00000545425 A6NDN8 102 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 HSD52Q0P140 79 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 DEFB113Q30KQ7 82 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 MRAP2Q96G30 205 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 ZMAT4Q9H898 229 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 IGHV3OR16-8A0A075B7F1 116 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 SMKR1H3BMG3 65 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 C16orf92Q96LL3 132 aa17.79■□□□□ 0.44
FOXA1-202ENST00000545425 BEX4Q9NWD9 120 aaPredicted RBP17.79■□□□□ 0.44
FOXA1-202ENST00000545425 MED14OSP0DP75 135 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 HLA-DRB4P13762 266 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 ARL3P36405 182 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 KIR3DS1Q14943 382 aa17.78■□□□□ 0.44
FOXA1-202ENST00000545425 ANKRD39Q53RE8 183 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms