RNA–Protein interactions for RNA: ENST00000543942.6

C12orf56-207, Transcript of chromosome 12 open reading frame 56, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C12orf56, Length 3,242 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-207ENST00000543942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.27□□□□□ -0.28
C12orf56-207ENST00000543942 NDUFA3O95167 84 aa13.27□□□□□ -0.28
C12orf56-207ENST00000543942 EFNA4P52798 201 aa13.27□□□□□ -0.28
C12orf56-207ENST00000543942 SRSF8Q9BRL6 282 aaKnown RBP13.27□□□□□ -0.28
C12orf56-207ENST00000543942 C11orf21Q9P2W6 132 aa13.27□□□□□ -0.28
C12orf56-207ENST00000543942 MRPL35Q9NZE8 188 aaKnown RBP13.27□□□□□ -0.29
C12orf56-207ENST00000543942 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 SMIM17P0DL12 118 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 NPBQ8NG41 125 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 G3V4G9 280 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 VMO1Q7Z5L0 202 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 NPFFR1Q9GZQ6 430 aa13.26□□□□□ -0.29
C12orf56-207ENST00000543942 IGKV3D-20A0A0C4DH25 116 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 G3V318 75 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 MAPKAPK5-AS1Q8N8E1 139 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 CDSNQ15517 529 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
C12orf56-207ENST00000543942 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 TIMD4Q96H15 378 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 LINC01548A6NM66 108 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 TTC9CQ8N5M4 171 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 IGHV7-81A0A0B4J1V7 117 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 SIVA1O15304 175 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 DEFB1P60022 68 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 SPANXN1Q5VSR9 72 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 AMTNQ6UX39 209 aa13.24□□□□□ -0.29
C12orf56-207ENST00000543942 DPM2O94777 84 aa13.23□□□□□ -0.29
C12orf56-207ENST00000543942 IGF2-ASQ6U949 168 aa13.23□□□□□ -0.29
C12orf56-207ENST00000543942 NXT2Q9NPJ8 142 aaKnown RBP13.23□□□□□ -0.29
C12orf56-207ENST00000543942 LY6G5BQ8NDX9 201 aa13.23□□□□□ -0.29
C12orf56-207ENST00000543942 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 PRTN3P24158 256 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 MYOZ3Q8TDC0 251 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 CREBBPQ92793 2442 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 CCL21O00585 134 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 NCOR2Q9Y618 2525 aa13.22□□□□□ -0.29
C12orf56-207ENST00000543942 H3BVH4 76 aa13.21□□□□□ -0.29
C12orf56-207ENST00000543942 IGF1P05019 195 aa13.21□□□□□ -0.29
C12orf56-207ENST00000543942 SFTA2Q6UW10 78 aa13.21□□□□□ -0.29
C12orf56-207ENST00000543942 HIF1ANQ9NWT6 349 aa13.21□□□□□ -0.29
C12orf56-207ENST00000543942 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
C12orf56-207ENST00000543942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 NEGR1Q7Z3B1 354 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 M0R381 172 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 BUB3O43684 328 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 WFDC2Q14508 124 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 HIST1H4GQ99525 98 aa13.2□□□□□ -0.3
C12orf56-207ENST00000543942 SORL1Q92673 2214 aa13.19□□□□□ -0.3
C12orf56-207ENST00000543942 SCGB2A1O75556 95 aa13.19□□□□□ -0.3
C12orf56-207ENST00000543942 Q8N8P6 123 aa13.19□□□□□ -0.3
C12orf56-207ENST00000543942 H3BMG7 143 aa13.19□□□□□ -0.3
C12orf56-207ENST00000543942 SH2D6Q7Z4S9 175 aa13.19□□□□□ -0.3
C12orf56-207ENST00000543942 IGHV3OR16-10A0A075B7F0 116 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 ODF3BA8MYP8 253 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 FOXC1Q12948 553 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 LAGE3Q14657 143 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 CEND1Q8N111 149 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 CHD8Q9HCK8 2581 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 Q8N9W7 124 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
C12orf56-207ENST00000543942 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 TMEM219Q86XT9 240 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 ZMAT4Q9H898 229 aa13.17□□□□□ -0.3
C12orf56-207ENST00000543942 CSPG4Q6UVK1 2322 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 HIVEP3Q5T1R4 2406 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 ETDBQ3ZM63 59 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 ATP5LO75964 103 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 RPL11P62913 178 aaKnown RBP13.16□□□□□ -0.3
C12orf56-207ENST00000543942 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 C16orf92Q96LL3 132 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 CYSLTR1Q9Y271 337 aa13.16□□□□□ -0.3
C12orf56-207ENST00000543942 C8orf86Q6ZUL3 223 aa13.15□□□□□ -0.3
C12orf56-207ENST00000543942 DOPEY2Q9Y3R5 2298 aa13.15□□□□□ -0.3
C12orf56-207ENST00000543942 IGLV2-18A0A075B6J9 118 aa13.15□□□□□ -0.3
C12orf56-207ENST00000543942 ZNF48Q96MX3 618 aaPredicted RBP13.15□□□□□ -0.3
C12orf56-207ENST00000543942 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 IGLL5B9A064 214 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 PRR9Q5T870 116 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 NRACQ8N912 160 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 CCDC140Q96MF4 163 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 CNFNQ9BYD5 112 aa13.15□□□□□ -0.31
C12orf56-207ENST00000543942 CLPSL1A2RUU4 121 aa13.14□□□□□ -0.31
C12orf56-207ENST00000543942 M0R1W7 72 aa13.14□□□□□ -0.31
C12orf56-207ENST00000543942 MGPP08493 103 aa13.14□□□□□ -0.31
C12orf56-207ENST00000543942 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms