RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 OR1N2Q8NGR9 330 aa7.11□□□□□ -1.27
GNE-206ENST00000543356 C4orf3Q8WVX3 66 aa7.11□□□□□ -1.27
GNE-206ENST00000543356 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
GNE-206ENST00000543356 V9GYV3 84 aa7.11□□□□□ -1.27
GNE-206ENST00000543356 IGHV4OR15-8A0A075B7B6 117 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 A0A087WW49 117 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 CHEK1O14757 476 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 FOXL1Q12952 345 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 TCTEX1D4Q5JR98 221 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
GNE-206ENST00000543356 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 ZNF492Q9P255 531 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 TRAV8-1A0A0A6YYK1 113 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 TRAV8-2A0A0B4J237 113 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 A0A1B0GV72 72 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 GAGE12BA1L429 117 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 NIT1Q86X76 327 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 SGK494Q96LW2 274 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 RHPN1-AS1Q9BWJ2 59 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 RNASE7Q9H1E1 156 aaKnown RBP7.1□□□□□ -1.27
GNE-206ENST00000543356 PSG8Q9UQ74 426 aa7.1□□□□□ -1.27
GNE-206ENST00000543356 RBAKDNA6NC62 111 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 G3V4G9 280 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 H0Y8G0 127 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 NDUFA7O95182 113 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
GNE-206ENST00000543356 LCN12Q6JVE5 192 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 OR4B1Q8NGF8 309 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 TP53TG3Q9ULZ0 132 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 OTOGQ6ZRI0 2925 aa7.09□□□□□ -1.27
GNE-206ENST00000543356 TMEM213A2RRL7 107 aa7.09□□□□□ -1.28
GNE-206ENST00000543356 SOCS3O14543 225 aa7.09□□□□□ -1.28
GNE-206ENST00000543356 HLA-DMBP28068 263 aa7.09□□□□□ -1.28
GNE-206ENST00000543356 HOXD3P31249 432 aaPredicted RBP7.09□□□□□ -1.28
GNE-206ENST00000543356 PET117Q6UWS5 81 aa7.09□□□□□ -1.28
GNE-206ENST00000543356 ZC2HC1AQ96GY0 325 aa7.09□□□□□ -1.28
GNE-206ENST00000543356 TYMSP04818 313 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 TSPOP30536 169 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 IGFL4Q6B9Z1 124 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 AMMECR1LQ6DCA0 310 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 IGKV2-40A0A087WW87 121 aaPredicted RBP7.08□□□□□ -1.28
GNE-206ENST00000543356 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 LINC01619G3V211 115 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 TAX1BP3O14907 124 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 IGKV2D-40P01614 121 aaPredicted RBP7.08□□□□□ -1.28
GNE-206ENST00000543356 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
GNE-206ENST00000543356 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 COX8CQ7Z4L0 72 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 RNF182Q8N6D2 247 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 DPF1Q92782 380 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 NRN1Q9NPD7 142 aa7.08□□□□□ -1.28
GNE-206ENST00000543356 CT83Q5H943 113 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 SMIM27A0A1W2PRY6 76 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 GRIFINA4D1Z8 144 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 INAFM1C9JVW0 142 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 EDN2P20800 178 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 SYNJ2BPP57105 145 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 PGPEP1Q9NXJ5 209 aa7.07□□□□□ -1.28
GNE-206ENST00000543356 MYO9AB2RTY4 2548 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 AZU1P20160 251 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 KHDC1LQ5JSQ8 128 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
GNE-206ENST00000543356 FER1L6-AS1Q8NA97 138 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 KLHL30-AS1Q8NEE0 82 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
GNE-206ENST00000543356 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
GNE-206ENST00000543356 C2orf70A6NJV1 201 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 PRAC2D3DTV9 90 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 SMAGPQ0VAQ4 97 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 DEFB136Q30KP8 78 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 OR11H1Q8NG94 326 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 PRR25Q96S07 402 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 VGLL1Q99990 258 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 TP73-AS1Q9UF72 201 aa7.06□□□□□ -1.28
GNE-206ENST00000543356 P01737 135 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 CD28P10747 220 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 SLURP1P55000 103 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 Q71RC1 249 aaPredicted RBP7.05□□□□□ -1.28
GNE-206ENST00000543356 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
GNE-206ENST00000543356 C20orf173Q96LM9 149 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 NDFIP1Q9BT67 221 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 TLN2Q9Y4G6 2542 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 F2Z2F3 143 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 SERF1AO75920 110 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 CBLN1P23435 193 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
GNE-206ENST00000543356 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 PEMTQ9UBM1 199 aa7.05□□□□□ -1.28
GNE-206ENST00000543356 TSSC4Q9Y5U2 329 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms