RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 PRR20CP86479 221 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 PRR20DP86480 221 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 PRR20BP86481 221 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 PRR20AP86496 221 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 Q6P435 159 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 SETD2Q9BYW2 2564 aaPredicted RBP9.97□□□□□ -0.81
KDM3A-216ENST00000542128 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
KDM3A-216ENST00000542128 XGP55808 180 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 USP9XQ93008 2570 aaPredicted RBP9.97□□□□□ -0.81
KDM3A-216ENST00000542128 E7EQL1 145 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 CCDC179H3BU77 68 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 IGHV3-11P01762 117 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 ABCA12Q86UK0 2595 aa9.97□□□□□ -0.81
KDM3A-216ENST00000542128 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.81
KDM3A-216ENST00000542128 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.81
KDM3A-216ENST00000542128 RSPO1Q2MKA7 263 aaPredicted RBP9.96□□□□□ -0.81
KDM3A-216ENST00000542128 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.81
KDM3A-216ENST00000542128 PMS2P5A8MQ11 134 aa9.96□□□□□ -0.81
KDM3A-216ENST00000542128 NUP210Q8TEM1 1887 aaPredicted RBP9.96□□□□□ -0.81
KDM3A-216ENST00000542128 CHD9Q3L8U1 2897 aa9.96□□□□□ -0.82
KDM3A-216ENST00000542128 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
KDM3A-216ENST00000542128 PPP1R17O96001 155 aa9.96□□□□□ -0.82
KDM3A-216ENST00000542128 FAM90A1Q86YD7 464 aa9.96□□□□□ -0.82
KDM3A-216ENST00000542128 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 IGF2-ASQ6U949 168 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
KDM3A-216ENST00000542128 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 C16orf92Q96LL3 132 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 SH2D1AO60880 128 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 DUX4L9Q6RFH8 374 aaPredicted RBP9.95□□□□□ -0.82
KDM3A-216ENST00000542128 TMEM133Q9H2Q1 129 aa9.95□□□□□ -0.82
KDM3A-216ENST00000542128 DSCAML1Q8TD84 2053 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 C10orf55Q5SWW7 151 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 FAM120AOSQ5T036 256 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 S4R3C0 116 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 COL8A2P25067 703 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 DDB2Q92466 427 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 FAM215AQ9Y5M1 114 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 LINC00527Q9UJ94 153 aa9.94□□□□□ -0.82
KDM3A-216ENST00000542128 F8VRH5 84 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
KDM3A-216ENST00000542128 EEF1AKMT3Q96AZ1 226 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 TMEM178BH3BS89 294 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 MORN5Q5VZ52 161 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 MRPL20Q9BYC9 149 aaKnown RBP9.93□□□□□ -0.82
KDM3A-216ENST00000542128 COPS9Q8WXC6 57 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 A0A1W2PPI3 338 aa9.93□□□□□ -0.82
KDM3A-216ENST00000542128 TNCP24821 2201 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 H3BUX3 64 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 SHISA9B4DS77 424 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 NPFFO15130 113 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 RNF182Q8N6D2 247 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 FAM74A4Q5TZK3 123 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 TMEM219Q86XT9 240 aa9.92□□□□□ -0.82
KDM3A-216ENST00000542128 IGKV2-40A0A087WW87 121 aaPredicted RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 A0A1W2PNU3 283 aaPredicted RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 PRSS46E5RG02 174 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 IGKV2D-40P01614 121 aaPredicted RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 RNASE1P07998 156 aaKnown RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 LGALS1P09382 135 aaKnown RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 DEFB121Q5J5C9 76 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 DENND4CQ5VZ89 1909 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 IGKV3-20P01619 116 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 IGHV3-23P01764 117 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 GATA3P23771 443 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
KDM3A-216ENST00000542128 NPC2P61916 151 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 FOXL2NBQ6ZUU3 175 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 Q8N8P6 123 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 CR1LQ2VPA4 569 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 SORL1Q92673 2214 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 IGHV3OR16-8A0A075B7F1 116 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 PROK2Q9HC23 129 aa9.91□□□□□ -0.82
KDM3A-216ENST00000542128 NCOA6Q14686 2063 aaPredicted RBP9.9□□□□□ -0.82
KDM3A-216ENST00000542128 TIMM23O14925 209 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 MSMBP08118 114 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 RPUSD1Q9UJJ7 312 aaKnown RBP9.9□□□□□ -0.82
KDM3A-216ENST00000542128 PRR14LQ5THK1 2151 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 A0A087WX48 190 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 FXYD5Q96DB9 178 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
KDM3A-216ENST00000542128 CEACAM4O75871 244 aa9.9□□□□□ -0.83
KDM3A-216ENST00000542128 Q8TAT8 98 aa9.9□□□□□ -0.83
KDM3A-216ENST00000542128 CARD19Q96LW7 228 aa9.9□□□□□ -0.83
KDM3A-216ENST00000542128 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
KDM3A-216ENST00000542128 CFC1P0CG37 223 aa9.89□□□□□ -0.83
KDM3A-216ENST00000542128 IGKV3-15P01624 115 aa9.89□□□□□ -0.83
KDM3A-216ENST00000542128 TRGV9Q99603 122 aa9.89□□□□□ -0.83
KDM3A-216ENST00000542128 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms