RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 KMT2BQ9UMN6 2715 aaPredicted RBP10.15□□□□□ -0.78
PRKAB1-206ENST00000541640 H3BUA1 57 aa10.15□□□□□ -0.79
PRKAB1-206ENST00000541640 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.79
PRKAB1-206ENST00000541640 C11orf21Q9P2W6 132 aa10.15□□□□□ -0.79
PRKAB1-206ENST00000541640 TP73-AS1Q9UF72 201 aa10.15□□□□□ -0.79
PRKAB1-206ENST00000541640 IGHG2P01859 326 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 PRSS57Q6UWY2 283 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 OR8A1Q8NGG7 326 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 DPF1Q92782 380 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
PRKAB1-206ENST00000541640 NDUFA4O00483 81 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 CCL25O15444 150 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 PPIFP30405 207 aaKnown RBP10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 CLEC2AQ6UVW9 174 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 FLNCQ14315 2725 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 A6NDX4 124 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 USMG5Q96IX5 58 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 LENEPQ9Y5L5 61 aa10.13□□□□□ -0.79
PRKAB1-206ENST00000541640 COX8AP10176 69 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 H3BUX3 64 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 TRBV12-3P01733 135 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 MPV17L2Q567V2 206 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 UNQ9165/PRO28630Q6UXU0 137 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 COX11Q9Y6N1 276 aa10.12□□□□□ -0.79
PRKAB1-206ENST00000541640 IGHV4-30-2A0A087WSY4 118 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 SMAD7O15105 426 aaKnown RBP10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 TNFRSF6BO95407 300 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 ATP5J2P56134 94 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 FXYD7P58549 80 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 LY6EQ16553 131 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 C20orf173Q96LM9 149 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 NXT2Q9NPJ8 142 aaKnown RBP10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 IGHV4-4A0A075B6R2 117 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 MSMBP08118 114 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 GPHB5Q86YW7 130 aa10.11□□□□□ -0.79
PRKAB1-206ENST00000541640 SOCS3O14543 225 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 SNAI2O43623 268 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 CACNG7P62955 275 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 FOXE3Q13461 319 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 BVES-AS1Q5T3Y7 98 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 C12orf54Q6X4T0 127 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 ZNF738Q8NE65 137 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 USP9XQ93008 2570 aaPredicted RBP10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 FAM208BQ5VWN6 2430 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 DOPEY1Q5JWR5 2465 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 NUDT3O95989 172 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
PRKAB1-206ENST00000541640 OVOL1O14753 267 aa10.09□□□□□ -0.79
PRKAB1-206ENST00000541640 FCER1GP30273 86 aa10.09□□□□□ -0.79
PRKAB1-206ENST00000541640 RBX1P62877 108 aa10.09□□□□□ -0.79
PRKAB1-206ENST00000541640 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 SRSF1Q07955 248 aaKnown RBP eCLIP10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 PRR9Q5T870 116 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 UBR5O95071 2799 aaPredicted RBP10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 AKAP6Q13023 2319 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 EVI2AP22794 236 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 BLCAPP62952 87 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 Q6ZQT7 251 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 C2orf91Q6ZV80 131 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 DEFB125Q8N687 156 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 KLK15Q9H2R5 256 aa10.08□□□□□ -0.8
PRKAB1-206ENST00000541640 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 PF4V1P10720 104 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 FGF6P10767 208 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 Q8N8P6 123 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 OR4X2Q8NGF9 303 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 A0A0G2JLM5 398 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 IGHV3-11P01762 117 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 LEPP41159 167 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 SPTAN1Q13813 2472 aaKnown RBP10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 ZFAND2AQ8N6M9 145 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
PRKAB1-206ENST00000541640 CFHR3Q02985 330 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 Q6ZS46 218 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 A1L4Q6 167 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 B4DSR2 109 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 UBE2V1Q13404 147 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 NRACQ8N912 160 aa10.06□□□□□ -0.8
PRKAB1-206ENST00000541640 FAM19A4Q96LR4 140 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms