RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 CD5LO43866 347 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 PF4V1P10720 104 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 HAX1O00165 279 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 CFHR3Q02985 330 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 MYO9AB2RTY4 2548 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 A0A087X0K7 114 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 IGLV1-40P01703 118 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 ZNF138P52744 262 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.3
PCDHB17P-201ENST00000539533 NOTCH2Q04721 2471 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 H3BUA1 57 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 IGHV3-11P01762 117 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 PET117Q6UWS5 81 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 Q71RC1 249 aaPredicted RBP13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 PRNTQ86SH4 94 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZC2HC1AQ96GY0 325 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 CUBNO60494 3623 aa13.14□□□□□ -0.31
PCDHB17P-201ENST00000539533 BRI3O95415 125 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 TRBV12-3P01733 135 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 GOLT1AQ6ZVE7 132 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZFAND3Q9H8U3 227 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 H0Y8G0 127 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 RAB9AP51151 201 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 HIST1H1AQ02539 215 aaPredicted RBP13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 HSPB8Q9UJY1 196 aa13.13□□□□□ -0.31
PCDHB17P-201ENST00000539533 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 SAP30O75446 220 aa13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 RIPPLY3P57055 190 aa13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 USMG5Q96IX5 58 aa13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZNF702PQ9H963 129 aa13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
PCDHB17P-201ENST00000539533 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZNF785A8K8V0 405 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 CSN3P07498 182 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 TEX29Q8N6K0 151 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 TRBV6-1A0A0K0K1D8 114 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 CLPSL1A2RUU4 121 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 C7orf71A4D174 169 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 IGHG4P01861 327 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 ARL3P36405 182 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 ATP6V0BQ99437 205 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
PCDHB17P-201ENST00000539533 ARMS2P0C7Q2 107 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 PSMB8P28062 276 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 TIMM8BQ9Y5J9 83 aaPredicted RBP13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 ANK3Q12955 4377 aaKnown RBP13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 TRBV19A0A075B6N1 114 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 GAGE10A6NGK3 116 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 LINC01545Q5VT33 79 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 OR4X2Q8NGF9 303 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 SMR3AQ99954 134 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 OTOGQ6ZRI0 2925 aa13.09□□□□□ -0.31
PCDHB17P-201ENST00000539533 RIGQ13278 110 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 FOXE3Q13461 319 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 IGHV3OR16-13A0A075B7E8 117 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 IGHV3-74A0A0B4J1X5 117 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 IGHV3-66A0A0C4DH42 116 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 SNAI2O43623 268 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 AP5S1Q9NUS5 200 aa13.08□□□□□ -0.32
PCDHB17P-201ENST00000539533 TMEM75Q8N9X5 138 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 FER1L6-AS1Q8NA97 138 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 C2orf91Q6ZV80 131 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 ASCL2Q99929 193 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 SMAD5-AS1Q9Y6J3 95 aa13.07□□□□□ -0.32
PCDHB17P-201ENST00000539533 NF1P21359 2839 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 BUB3O43684 328 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 UNQ9165/PRO28630Q6UXU0 137 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 ZNF747Q9BV97 191 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 COX8AP10176 69 aa13.06□□□□□ -0.32
PCDHB17P-201ENST00000539533 RPL7P18124 248 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms