RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RYR1P21817 5038 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 RBAKDNA6NC62 111 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 TNP2Q05952 138 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 TTC32Q5I0X7 151 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 ZNF575Q86XF7 245 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 UPK3BQ9BT76 320 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 Q9H8V8 135 aa15.39■□□□□ 0.05
SCARB1-206ENST00000539320 Q6ZQT7 251 aa15.38■□□□□ 0.05
SCARB1-206ENST00000539320 VSIG2Q96IQ7 327 aa15.38■□□□□ 0.05
SCARB1-206ENST00000539320 TP53TG3Q9ULZ0 132 aa15.38■□□□□ 0.05
SCARB1-206ENST00000539320 MRPS16Q9Y3D3 137 aaKnown RBP15.38■□□□□ 0.05
SCARB1-206ENST00000539320 ZNF415Q09FC8 603 aa15.37■□□□□ 0.05
SCARB1-206ENST00000539320 ZNF266Q14584 549 aa15.37■□□□□ 0.05
SCARB1-206ENST00000539320 ESRGQ1W209 222 aa15.37■□□□□ 0.05
SCARB1-206ENST00000539320 WFDC1Q9HC57 220 aa15.37■□□□□ 0.05
SCARB1-206ENST00000539320 MRPL16Q9NX20 251 aaKnown RBP15.37■□□□□ 0.05
SCARB1-206ENST00000539320 LRP1BQ9NZR2 4599 aa15.36■□□□□ 0.05
SCARB1-206ENST00000539320 ST6GAL2Q96JF0 529 aa15.36■□□□□ 0.05
SCARB1-206ENST00000539320 A0A096LPF7 62 aa15.35■□□□□ 0.05
SCARB1-206ENST00000539320 DIRC3C9JPN6 131 aa15.35■□□□□ 0.05
SCARB1-206ENST00000539320 EIF3GO75821 320 aaKnown RBP eCLIP15.35■□□□□ 0.05
SCARB1-206ENST00000539320 ACOT6Q3I5F7 207 aaPredicted RBP15.35■□□□□ 0.05
SCARB1-206ENST00000539320 KRTAP1-5Q9BYS1 174 aa15.35■□□□□ 0.05
SCARB1-206ENST00000539320 OTORQ9NRC9 128 aa15.35■□□□□ 0.05
SCARB1-206ENST00000539320 LENEPQ9Y5L5 61 aa15.34■□□□□ 0.05
SCARB1-206ENST00000539320 ALG5Q9Y673 324 aa15.34■□□□□ 0.05
SCARB1-206ENST00000539320 hCG_2014768A0A024R1R8 64 aa15.33■□□□□ 0.04
SCARB1-206ENST00000539320 IGHV3-53P01767 116 aa15.33■□□□□ 0.04
SCARB1-206ENST00000539320 MUC21Q5SSG8 566 aa15.33■□□□□ 0.04
SCARB1-206ENST00000539320 PQLC2Q6ZP29 291 aa15.33■□□□□ 0.04
SCARB1-206ENST00000539320 HYLS1Q96M11 299 aa15.33■□□□□ 0.04
SCARB1-206ENST00000539320 A0A1W2PPV4 95 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 RAB2AP61019 212 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 Q6AWC8 147 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 CMTM2Q8TAZ6 248 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 TMED6Q8WW62 240 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 RPH3ALQ9UNE2 315 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 ICOSQ9Y6W8 199 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 PCLOQ9Y6V0 5065 aa15.32■□□□□ 0.04
SCARB1-206ENST00000539320 A0A1W2PPQ1 181 aa15.31■□□□□ 0.04
SCARB1-206ENST00000539320 PAX4O43316 350 aa15.31■□□□□ 0.04
SCARB1-206ENST00000539320 FAM74A1Q5RGS3 127 aa15.31■□□□□ 0.04
SCARB1-206ENST00000539320 Q6ZNX1 250 aa15.31■□□□□ 0.04
SCARB1-206ENST00000539320 A0A1B0GVG6 124 aa15.3■□□□□ 0.04
SCARB1-206ENST00000539320 C16orf90A8MZG2 172 aa15.3■□□□□ 0.04
SCARB1-206ENST00000539320 PRO0255Q9UI72 69 aa15.3■□□□□ 0.04
SCARB1-206ENST00000539320 HSPG2P98160 4391 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 TRGV11A0A075B6L2 103 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 PGPA6NDG6 321 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 SLAQ13239 276 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 TMEM183BQ1AE95 376 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
SCARB1-206ENST00000539320 FAM159AQ6UWV7 190 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 GOLT1AQ6ZVE7 132 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 OR10G4Q8NGN3 311 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 OR10G9Q8NGN4 311 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 OR10G7Q8NGN6 311 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 MDFICQ9P1T7 246 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 NAGKQ9UJ70 344 aa15.28■□□□□ 0.04
SCARB1-206ENST00000539320 BTF3P20290 206 aaKnown RBP15.27■□□□□ 0.04
SCARB1-206ENST00000539320 CRYBA4P53673 196 aa15.27■□□□□ 0.04
SCARB1-206ENST00000539320 ARL6IP6Q8N6S5 226 aa15.27■□□□□ 0.04
SCARB1-206ENST00000539320 C8orf49Q96NF6 230 aa15.27■□□□□ 0.04
SCARB1-206ENST00000539320 HMGB3O15347 200 aaKnown RBP15.26■□□□□ 0.03
SCARB1-206ENST00000539320 CDC34P49427 236 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-206ENST00000539320 FHL2Q14192 279 aa15.26■□□□□ 0.03
SCARB1-206ENST00000539320 HSD17B11Q8NBQ5 300 aa15.26■□□□□ 0.03
SCARB1-206ENST00000539320 OR2G3Q8NGZ4 309 aa15.26■□□□□ 0.03
SCARB1-206ENST00000539320 SPXQ9BT56 116 aa15.26■□□□□ 0.03
SCARB1-206ENST00000539320 NXPH4O95158 308 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 ARL14EPLP0DKL9 152 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 GNG5P63218 68 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 TDRG1Q3Y452 100 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 AQP10Q96PS8 301 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 MED28Q9H204 178 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 HHLA3Q9XRX5 114 aa15.25■□□□□ 0.03
SCARB1-206ENST00000539320 TRAV8-1A0A0A6YYK1 113 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 TRGV4A0A0C4DH28 118 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 F6UZH7 168 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 SIVA1O15304 175 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 SFTA3P0C7M3 94 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 MRPL23Q16540 153 aaKnown RBP15.24■□□□□ 0.03
SCARB1-206ENST00000539320 RASL10AQ92737 203 aa15.24■□□□□ 0.03
SCARB1-206ENST00000539320 PSMG3Q9BT73 122 aaPredicted RBP15.24■□□□□ 0.03
SCARB1-206ENST00000539320 TRAV21A0A0B4J279 112 aa15.23■□□□□ 0.03
SCARB1-206ENST00000539320 LINC00315P59091 139 aa15.23■□□□□ 0.03
SCARB1-206ENST00000539320 ZNF479Q96JC4 524 aa15.23■□□□□ 0.03
SCARB1-206ENST00000539320 TREM1Q9NP99 234 aa15.23■□□□□ 0.03
SCARB1-206ENST00000539320 DNAH5Q8TE73 4624 aa15.23■□□□□ 0.03
SCARB1-206ENST00000539320 STAG3L2P0CL84 134 aa15.22■□□□□ 0.03
SCARB1-206ENST00000539320 STAG3L3P0CL85 134 aa15.22■□□□□ 0.03
SCARB1-206ENST00000539320 ATP6V0CP27449 155 aa15.22■□□□□ 0.03
SCARB1-206ENST00000539320 SPATA12Q7Z6I5 190 aa15.22■□□□□ 0.03
SCARB1-206ENST00000539320 TVP23CQ96ET8 276 aa15.22■□□□□ 0.03
SCARB1-206ENST00000539320 APOBP04114 4563 aaKnown RBP15.21■□□□□ 0.03
SCARB1-206ENST00000539320 IGHV3-16A0A0C4DH30 117 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 SERTM2A0A1B0GWG4 89 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 NEGR1Q7Z3B1 354 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 C5orf17Q8NAS9 161 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 PCNPQ8WW12 178 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms