RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 HIST3H2BBQ8N257 126 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 C10orf126Q8N4M7 172 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TTC9CQ8N5M4 171 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF525Q8N782 197 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF709Q8N972 641 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF555Q8NEP9 628 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 DEFB108BQ8NET1 73 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5AP2Q8NGF4 316 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR5AK2Q8NH90 309 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 CLDND2Q8NHS1 167 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 RFESDQ8TAC1 157 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 BRK1Q8WUW1 75 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PHLDA1Q8WV24 401 aaPredicted RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ITLN1Q8WWA0 313 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 IL1F10Q8WWZ1 152 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SRSF12Q8WXF0 261 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SPTSSAQ969W0 71 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM106AQ96A25 262 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM230Q96A57 120 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PLEKHB2Q96CS7 222 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A38Q96DW6 304 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 C2orf48Q96LS8 159 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GAFA1Q96PS6 74 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 OR4C12Q96R67 309 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 CCL19Q99731 98 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GGTLC1Q9BX51 225 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TM2D1Q9BX74 207 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 GNB1LQ9BYB4 327 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 MRPL20Q9BYC9 149 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TTTY10Q9BZA0 68 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SELENOIQ9C0D9 397 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 COMMD5Q9GZQ3 224 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SLIRPQ9GZT3 109 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TXNL4BQ9NX01 149 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 EHFQ9NZC4 300 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF581Q9P0T4 197 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TAAR3PQ9P1P4 343 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 SHPKQ9UHJ6 478 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 FUT9Q9Y231 359 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 NOP16Q9Y3C1 178 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 YTHDF2Q9Y5A9 579 aaKnown RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 TET2Q6N021 2002 aaPredicted RBP1.37□□□□□ -2.19
CBX3P4-201ENST00000538909 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NOTCH1P46531 2555 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 TRGV10A0A0A0MS01 117 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 IGHV1-69-2A0A0G2JMI3 117 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A1W2PP11 408 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PLAC8L1A1L4L8 177 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GGT3PA6NGU5 568 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OR2T8A6NH00 312 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C17orf98A8MV24 154 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ODF3BA8MYP8 253 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 B4DEV8 164 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LYNX1G3V0Z9 82 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 G3V3Q6 166 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 H3BQ15 152 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 J3QLW9 94 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 J3QQQ9 107 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 K7N7A8 449 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 OVOL1O14753 267 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 AGPAT2O15120 278 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GSTZ1O43708 216 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ANGPTL7O43827 346 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CD5LO43866 347 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFS5O43920 106 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SIX6O95475 246 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NAPSAO96009 420 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CYB5AP00167 134 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 RBP4P02753 201 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 LYNX1P0DP58 116 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 BCL2P10415 239 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CA6P23280 308 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 GADD45AP24522 165 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PRSS3P35030 304 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PFN2P35080 140 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 SRP14P37108 136 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CTRLP40313 264 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 RPS10P46783 165 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 INPP1P49441 399 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PSMB2P49721 201 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF137PP52743 207 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFV3P56181 108 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CAV3P56539 151 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 TAS2R46P59540 309 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 FGF12P61328 243 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAD1P61803 113 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 CCL8P80075 99 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PSG9Q00887 426 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 PAX8Q06710 450 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 DAZ2Q13117 558 aaKnown RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 EIF4EBP1Q13541 118 aaPredicted RBP1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 HMGN3Q15651 99 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KISS1Q15726 138 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C17orf58Q2M2W7 97 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 C12orf74Q32Q52 190 aa1.36□□□□□ -2.19
CBX3P4-201ENST00000538909 KRTAP21-3Q3LHN1 58 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms