RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CECR9P0C854 216 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 CD59P13987 128 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 RPL7P18124 248 aaKnown RBP5.19□□□□□ -1.58
USP28-207ENST00000538475 LYZP61626 148 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 FAM201AQ5SY85 155 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 SPINK14Q6IE38 97 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 ASCL5Q7RTU5 278 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 NDUFA11Q86Y39 141 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 EXOC3-AS1Q8N2X6 119 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 C10orf126Q8N4M7 172 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 IL17DQ8TAD2 202 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 SLC50A1Q9BRV3 221 aa5.19□□□□□ -1.58
USP28-207ENST00000538475 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 E7EUB6 86 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 J3KRW8 73 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 M0R381 172 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ZNHIT1O43257 154 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SLC25A20O43772 301 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ACYP1P07311 99 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
USP28-207ENST00000538475 FHL3Q13643 280 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 MRGPRG-AS1Q2M3A8 158 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SPRNQ5BIV9 151 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 DEFB121Q5J5C9 76 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 LEAP2Q969E1 77 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 TOMM6Q96B49 74 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 MRPL53Q96EL3 112 aaKnown RBP5.18□□□□□ -1.58
USP28-207ENST00000538475 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 TPPP3Q9BW30 176 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ONECUT1Q9UBC0 465 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 FZR1Q9UM11 496 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SELENOKQ9Y6D0 94 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 ZGRF1Q86YA3 2104 aa5.18□□□□□ -1.58
USP28-207ENST00000538475 SVILO95425 2214 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ARFGEF3Q5TH69 2177 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 IGHV3OR15-7A0A075B7D8 119 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 A0A0B4J2C4 111 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 TCL1BO95988 128 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 EGR2P11161 476 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 COX6B1P14854 86 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 GATA3P23771 443 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 ATXN8Q156A1 80 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 C5orf47Q569G3 176 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 Q71RC1 249 aaPredicted RBP5.17□□□□□ -1.58
USP28-207ENST00000538475 TDHQ8IZJ6 230 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ZNF491Q8N8L2 437 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 NRACQ8N912 160 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 DNAJC30Q96LL9 226 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SMIM2Q9BVW6 85 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 SPRY4Q9C004 299 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 YAE1D1Q9NRH1 226 aa5.17□□□□□ -1.58
USP28-207ENST00000538475 ABCA1O95477 2261 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TRAV8-4A0A0B4J246 113 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 IGHV1-18A0A0C4DH31 117 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 IGHV3-64DA0A0J9YX35 117 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 A0A1B0GX51 115 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 H3BT86 120 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LYZL6O75951 148 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TFF1P04155 84 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 CCL4P13236 92 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 ERCC8Q13216 396 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SCGB1D4Q6XE38 83 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 DTX2Q86UW9 622 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LRRC75A-AS1Q8N1F1 130 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 NRGNQ92686 78 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TIMD4Q96H15 378 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SCGB3A1Q96QR1 104 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 PRADC1Q9BSG0 188 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TTTY13Q9BZ97 58 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 LENEPQ9Y5L5 61 aa5.16□□□□□ -1.58
USP28-207ENST00000538475 TRAV8-2A0A0B4J237 113 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 A0A0J9YX75 114 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 A0A0J9YY99 117 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TRBV10-2A0A0K0K1G8 114 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 EPOPA6NHQ4 379 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SMKR1H3BMG3 65 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SLPIP03973 132 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PRTN3P24158 256 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
USP28-207ENST00000538475 CXCL12P48061 93 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TNFAIP6P98066 277 aaPredicted RBP5.15□□□□□ -1.59
USP28-207ENST00000538475 TMEM170BQ5T4T1 132 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 RASL10AQ92737 203 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PTH2Q96A98 100 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 TMEM141Q96I45 108 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms