RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZFP69Q49AA0 526 aa16.18■□□□□ 0.18
SFSWAP-204ENST00000535399 TVP23CQ96ET8 276 aa16.18■□□□□ 0.18
SFSWAP-204ENST00000535399 LINC00467Q9BRT7 94 aa16.18■□□□□ 0.18
SFSWAP-204ENST00000535399 LCE6AA0A183 80 aa16.17■□□□□ 0.18
SFSWAP-204ENST00000535399 LYRM9A8MSI8 78 aa16.17■□□□□ 0.18
SFSWAP-204ENST00000535399 SLC51BQ86UW2 128 aa16.17■□□□□ 0.18
SFSWAP-204ENST00000535399 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
SFSWAP-204ENST00000535399 SFT2D1Q8WV19 159 aa16.17■□□□□ 0.18
SFSWAP-204ENST00000535399 DNAH1Q9P2D7 4330 aa16.16■□□□□ 0.18
SFSWAP-204ENST00000535399 C2CD4CQ8TF44 421 aa16.16■□□□□ 0.18
SFSWAP-204ENST00000535399 SGK494Q96LW2 274 aa16.16■□□□□ 0.18
SFSWAP-204ENST00000535399 ALMS1Q8TCU4 4167 aa16.16■□□□□ 0.18
SFSWAP-204ENST00000535399 RYR3Q15413 4870 aa16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 DEFB131BA0A096LNP1 70 aa16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 IGLV2-11P01706 119 aa16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 EIF5AL1Q6IS14 154 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 CYB561D1Q8N8Q1 229 aa16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 ATG101Q9BSB4 218 aa16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 TIMM8BQ9Y5J9 83 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-204ENST00000535399 DAD1P61803 113 aa16.14■□□□□ 0.17
SFSWAP-204ENST00000535399 ANXA2RQ3ZCQ2 193 aa16.14■□□□□ 0.17
SFSWAP-204ENST00000535399 Q6AWC8 147 aa16.14■□□□□ 0.17
SFSWAP-204ENST00000535399 NKX6-2Q9C056 277 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-204ENST00000535399 NOP10Q9NPE3 64 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-204ENST00000535399 K7EQM0 130 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 IFNA7P01567 189 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 H2AFB1P0C5Y9 115 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 RAB5CP51148 216 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 EIF4E3Q8N5X7 224 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 TREM1Q9NP99 234 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 PSG8Q9UQ74 426 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 RYR2Q92736 4967 aa16.13■□□□□ 0.17
SFSWAP-204ENST00000535399 IGHV1OR15-1A0A075B7D0 117 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 A0A1B0GV50 99 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 IGLL5B9A064 214 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 RGS13O14921 159 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 SULT1A2P50226 295 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 TMEM75Q8N9X5 138 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 C11orf72Q8NBR9 251 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 ARL2-SNX15V9GYD0 113 aa16.12■□□□□ 0.17
SFSWAP-204ENST00000535399 CBY3A6NI87 242 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 F6UZH7 168 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 PEX7O00628 323 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 DEFB130BP0DP73 79 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 DEFB130AP0DP74 79 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 FLI1Q01543 452 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 ZNF680Q8NEM1 530 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 LINC00479Q96M42 142 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 TP53TG3Q9ULZ0 132 aa16.11■□□□□ 0.17
SFSWAP-204ENST00000535399 TRAV34A0A0B4J273 112 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 FBLL1A6NHQ2 334 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 PAGE4O60829 102 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 CST9LP1Q5W188 147 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 HIST1H2BAQ96A08 127 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 NDFIP1Q9BT67 221 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 GSN-AS1Q9NRJ2 163 aa16.1■□□□□ 0.17
SFSWAP-204ENST00000535399 SNURFLB1AK76 121 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 ATP5G3P48201 142 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 NKX2-5P52952 324 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 DAZ2Q13117 558 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 PRNTQ86SH4 94 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 LINC00612Q8N6U2 182 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 C8orf49Q96NF6 230 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 APLNQ9ULZ1 77 aa16.09■□□□□ 0.17
SFSWAP-204ENST00000535399 IGHV4-4A0A075B6R2 117 aa16.08■□□□□ 0.16
SFSWAP-204ENST00000535399 TRAV1-1A0A0B4J248 108 aa16.08■□□□□ 0.16
SFSWAP-204ENST00000535399 TCTAP57738 103 aa16.08■□□□□ 0.16
SFSWAP-204ENST00000535399 MUC21Q5SSG8 566 aa16.08■□□□□ 0.16
SFSWAP-204ENST00000535399 TCEAL7Q9BRU2 100 aa16.08■□□□□ 0.16
SFSWAP-204ENST00000535399 TRAV21A0A0B4J279 112 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 HTN3P15516 51 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 TCL1AP56279 114 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 CCL20P78556 96 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 IBA57Q5T440 356 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 LINC00476Q8WZB0 136 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 KLF12Q9Y4X4 402 aa16.07■□□□□ 0.16
SFSWAP-204ENST00000535399 PPT1P50897 306 aa16.06■□□□□ 0.16
SFSWAP-204ENST00000535399 ZNF80P51504 273 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-204ENST00000535399 TDRG1Q3Y452 100 aa16.05■□□□□ 0.16
SFSWAP-204ENST00000535399 SAPCD1Q5SSQ6 148 aa16.05■□□□□ 0.16
SFSWAP-204ENST00000535399 Q86TA4 180 aa16.05■□□□□ 0.16
SFSWAP-204ENST00000535399 GAGE12BA1L429 117 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 GAGE7O76087 117 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 GAGE12FP0CL80 117 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 GAGE12GP0CL81 117 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 GAGE12IP0CL82 117 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 SMUG1Q53HV7 270 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 FAM159AQ6UWV7 190 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 Q6ZTI0 123 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 FAM210BQ96KR6 192 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 NAGKQ9UJ70 344 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 BOLA1Q9Y3E2 137 aa16.04■□□□□ 0.16
SFSWAP-204ENST00000535399 GCGP01275 180 aa16.03■□□□□ 0.16
SFSWAP-204ENST00000535399 MDFICQ9P1T7 246 aa16.03■□□□□ 0.16
SFSWAP-204ENST00000535399 SPINK4O60575 86 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 ATP5G1P05496 136 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 ZNF415Q09FC8 603 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 TMEM183BQ1AE95 376 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 TMEM183AQ8IXX5 376 aa16.02■□□□□ 0.16
SFSWAP-204ENST00000535399 GNG13Q9P2W3 67 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms