RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PRIMA1Q86XR5 153 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BHQ93079 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BNQ99877 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 HIST1H2BMQ99879 126 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 NDFIP1Q9BT67 221 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 VWFP04275 2813 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 IFITM10A6NMD0 228 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 NPIPB6E9PJ23 425 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TRGC2P03986 189 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 GDF5OSQ5U4N7 250 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 COX8CQ7Z4L0 72 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 IL36BQ9NZH7 164 aa15.2■□□□□ 0.02
TNFRSF1A-205ENST00000534885 A0A1W2PPQ1 181 aa15.19■□□□□ 0.02
TNFRSF1A-205ENST00000534885 SAP30O75446 220 aa15.19■□□□□ 0.02
TNFRSF1A-205ENST00000534885 CT45A10P0DMU9 189 aa15.19■□□□□ 0.02
TNFRSF1A-205ENST00000534885 ZNF80P51504 273 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-205ENST00000534885 AGRNO00468 2067 aa15.19■□□□□ 0.02
TNFRSF1A-205ENST00000534885 P01737 135 aa15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 DAZAP1Q96EP5 407 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 S100A2P29034 98 aa15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 LINC00477Q96M19 166 aa15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 IMMP2LQ96T52 175 aa15.18■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TRBV24-1A0A075B6N3 115 aa15.17■□□□□ 0.02
TNFRSF1A-205ENST00000534885 CD33P20138 364 aa15.17■□□□□ 0.02
TNFRSF1A-205ENST00000534885 KCNIP4Q6PIL6 250 aa15.17■□□□□ 0.02
TNFRSF1A-205ENST00000534885 RPP21Q9H633 154 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TRAV2A0A0B4J234 112 aa15.16■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TCL1AP56279 114 aa15.16■□□□□ 0.02
TNFRSF1A-205ENST00000534885 SH2D1AO60880 128 aa15.16■□□□□ 0.02
TNFRSF1A-205ENST00000534885 RPL19P84098 196 aaKnown RBP15.16■□□□□ 0.02
TNFRSF1A-205ENST00000534885 ZNF256Q9Y2P7 627 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TRGC1P0CF51 173 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 FAM162BQ5T6X4 162 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 FRZBQ92765 325 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 SPAG8Q99932 426 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 TRAV25A0A0B4J276 109 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 SPATA3Q8NHX4 192 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 PYGO2Q9BRQ0 406 aa15.15■□□□□ 0.02
TNFRSF1A-205ENST00000534885 A0A0J9YX75 114 aa15.14■□□□□ 0.01
TNFRSF1A-205ENST00000534885 SMIM27A0A1W2PRY6 76 aa15.14■□□□□ 0.01
TNFRSF1A-205ENST00000534885 DEFB131AP59861 70 aa15.14■□□□□ 0.01
TNFRSF1A-205ENST00000534885 PRR9Q5T870 116 aa15.14■□□□□ 0.01
TNFRSF1A-205ENST00000534885 LENEPQ9Y5L5 61 aa15.14■□□□□ 0.01
TNFRSF1A-205ENST00000534885 IGLV1-51P01701 117 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 PYY3Q5JQD4 70 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 HIST3H2BBQ8N257 126 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 ZFAND2AQ8N6M9 145 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 OR2D3Q8NGH3 330 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 FAM19A4Q96LR4 140 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 OR4C46A6NHA9 309 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 J3KRW8 73 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 PHOX2AO14813 284 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 TSKUQ8WUA8 353 aa15.13■□□□□ 0.01
TNFRSF1A-205ENST00000534885 GZMBP10144 247 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 CT83Q5H943 113 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 OR4B1Q8NGF8 309 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 NEU1Q99519 415 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 MAP6D1Q9H9H5 199 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 IGKV3-20P01619 116 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 KIR3DS1Q14943 382 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 GFI1BQ5VTD9 330 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 EBLN2Q6P2I7 272 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 Q6ZQT7 251 aa15.12■□□□□ 0.01
TNFRSF1A-205ENST00000534885 FOXI2Q6ZQN5 318 aa15.11■□□□□ 0.01
TNFRSF1A-205ENST00000534885 OR10D4PQ8NGN7 298 aa15.11■□□□□ 0.01
TNFRSF1A-205ENST00000534885 FABP5P3A8MUU1 101 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 HIGD1CA8MV81 97 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 A8MWL6 223 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 SPINK4O60575 86 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 GTSF1Q8WW33 167 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 SRD5A3Q9H8P0 318 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 TRRAPQ9Y4A5 3859 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 NOTCH3Q9UM47 2321 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 KNCNA6PVL3 124 aa15.1■□□□□ 0.01
TNFRSF1A-205ENST00000534885 TMSB15BA0A087X1C1 80 aa15.09■□□□□ 0.01
TNFRSF1A-205ENST00000534885 ODF3L2Q3SX64 289 aa15.09■□□□□ 0.01
TNFRSF1A-205ENST00000534885 NUP35Q8NFH5 326 aa15.09■□□□□ 0.01
TNFRSF1A-205ENST00000534885 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
TNFRSF1A-205ENST00000534885 FRMD6-AS1P0C7T7 363 aa15.08■□□□□ 0.01
TNFRSF1A-205ENST00000534885 CRISP2P16562 243 aa15.08■□□□□ 0.01
TNFRSF1A-205ENST00000534885 ACTL10Q5JWF8 245 aa15.08■□□□□ 0.01
TNFRSF1A-205ENST00000534885 APRG1Q8IVJ8 170 aa15.08■□□□□ 0.01
TNFRSF1A-205ENST00000534885 C11orf21Q9P2W6 132 aa15.08■□□□□ 0.01
TNFRSF1A-205ENST00000534885 TRAV9-1A0A075B6T8 112 aa15.08■□□□□ 0
TNFRSF1A-205ENST00000534885 TMEM189A5PLL7 270 aa15.08■□□□□ 0
TNFRSF1A-205ENST00000534885 GPX1P07203 203 aa15.08■□□□□ 0
TNFRSF1A-205ENST00000534885 PDZD11Q5EBL8 140 aa15.08■□□□□ 0
TNFRSF1A-205ENST00000534885 NAT8BQ9UHF3 227 aa15.08■□□□□ 0
TNFRSF1A-205ENST00000534885 TRBV7-9A0A0J9YWB2 115 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 TYMSP04818 313 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 ZNF575Q86XF7 245 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 STAB1Q9NY15 2570 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 ORM1P02763 201 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 GFRA4Q9GZZ7 299 aa15.07■□□□□ 0
TNFRSF1A-205ENST00000534885 DUSP14O95147 198 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-205ENST00000534885 HLA-DRB4P13762 266 aa15.06■□□□□ 0
TNFRSF1A-205ENST00000534885 RNASE4P34096 147 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-205ENST00000534885 ANKRD39Q53RE8 183 aa15.06■□□□□ 0
TNFRSF1A-205ENST00000534885 HLA-DRB4X5D2U9 266 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms