RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
CAPN1-228ENST00000534373 ZNF266Q14584 549 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 ESRGQ1W209 222 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 MBD2Q9UBB5 411 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
CAPN1-228ENST00000534373 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 ACOT6Q3I5F7 207 aaPredicted RBP9.28□□□□□ -0.92
CAPN1-228ENST00000534373 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 PRR9Q5T870 116 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 PQLC2Q6ZP29 291 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 ST6GAL2Q96JF0 529 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 SMIM3Q9BZL3 60 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
CAPN1-228ENST00000534373 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
CAPN1-228ENST00000534373 A0A1W2PPV4 95 aa9.27□□□□□ -0.93
CAPN1-228ENST00000534373 Q6AWC8 147 aa9.27□□□□□ -0.93
CAPN1-228ENST00000534373 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
CAPN1-228ENST00000534373 A0A096LPF7 62 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 PGPA6NDG6 321 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 TNP2Q05952 138 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 ZNF415Q09FC8 603 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 Q8TAT8 98 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
CAPN1-228ENST00000534373 MUC4Q99102 2169 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 PAX4O43316 350 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 Q6ZQT7 251 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 IQCF2Q8IXL9 164 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 SPXQ9BT56 116 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 HHLA3Q9XRX5 114 aa9.25□□□□□ -0.93
CAPN1-228ENST00000534373 OR10G4Q8NGN3 311 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 ASB13Q8WXK3 278 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 RASL10AQ92737 203 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 HYLS1Q96M11 299 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
CAPN1-228ENST00000534373 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 CRYBA4P53673 196 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 FHL2Q14192 279 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 MRPL23Q16540 153 aaKnown RBP9.23□□□□□ -0.93
CAPN1-228ENST00000534373 AQP10Q96PS8 301 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
CAPN1-228ENST00000534373 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
CAPN1-228ENST00000534373 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
CAPN1-228ENST00000534373 MBP02144 154 aa9.22□□□□□ -0.93
CAPN1-228ENST00000534373 GIPP09681 153 aaPredicted RBP9.22□□□□□ -0.93
CAPN1-228ENST00000534373 RAB2AP61019 212 aa9.22□□□□□ -0.93
CAPN1-228ENST00000534373 SERF2P84101 59 aa9.22□□□□□ -0.93
CAPN1-228ENST00000534373 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
CAPN1-228ENST00000534373 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
CAPN1-228ENST00000534373 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 SIVA1O15304 175 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 STAG3L2P0CL84 134 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 STAG3L3P0CL85 134 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 CDC34P49427 236 aaPredicted RBP9.21□□□□□ -0.94
CAPN1-228ENST00000534373 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 GOLT1AQ6ZVE7 132 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 TMEM183AQ8IXX5 376 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 SUN5Q8TC36 379 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 KCNS1Q96KK3 526 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 KRTAP1-5Q9BYS1 174 aa9.21□□□□□ -0.94
CAPN1-228ENST00000534373 TRGV4A0A0C4DH28 118 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 TREM1Q9NP99 234 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 TNFSF18Q9UNG2 199 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 RYR1P21817 5038 aa9.2□□□□□ -0.94
CAPN1-228ENST00000534373 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 K7EP13 123 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 K7EQM0 130 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 M0R2P5 195 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 HMGB3O15347 200 aaKnown RBP9.19□□□□□ -0.94
CAPN1-228ENST00000534373 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
CAPN1-228ENST00000534373 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 ORM1P02763 201 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 ARL14EPLP0DKL9 152 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 ATP6V0CP27449 155 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 C5orf17Q8NAS9 161 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 HSD17B11Q8NBQ5 300 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 C8orf49Q96NF6 230 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
CAPN1-228ENST00000534373 TRAV4A0A0B4J268 109 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms