RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 CCDC28AQ8IWP9 274 aa15.9■□□□□ 0.14
PKP3-210ENST00000533249 SFT2D1Q8WV19 159 aa15.9■□□□□ 0.14
PKP3-210ENST00000533249 C20orf144Q9BQM9 153 aa15.9■□□□□ 0.14
PKP3-210ENST00000533249 Q9H8V8 135 aa15.9■□□□□ 0.14
PKP3-210ENST00000533249 A0A0J9YY99 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 GAGE12BA1L429 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 MAP1LC3B2A6NCE7 125 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 EIF3GO75821 320 aaKnown RBP eCLIP15.89■□□□□ 0.13
PKP3-210ENST00000533249 CDK2AP2O75956 126 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 GAGE7O76087 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 GAGE12FP0CL80 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 GAGE12GP0CL81 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 GAGE12IP0CL82 117 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 MAP1LC3BQ9GZQ8 125 aa15.89■□□□□ 0.13
PKP3-210ENST00000533249 CXorf1O96002 111 aa15.88■□□□□ 0.13
PKP3-210ENST00000533249 PQLC2Q6ZP29 291 aa15.88■□□□□ 0.13
PKP3-210ENST00000533249 MAPKAPK5-AS1Q8N8E1 139 aa15.88■□□□□ 0.13
PKP3-210ENST00000533249 SAT2Q96F10 170 aaPredicted RBP15.88■□□□□ 0.13
PKP3-210ENST00000533249 PAXXQ9BUH6 204 aa15.88■□□□□ 0.13
PKP3-210ENST00000533249 OR51M1Q9H341 326 aa15.88■□□□□ 0.13
PKP3-210ENST00000533249 A0A1B0GV50 99 aa15.87■□□□□ 0.13
PKP3-210ENST00000533249 ZNF726P1Q15940 193 aa15.87■□□□□ 0.13
PKP3-210ENST00000533249 LINC00612Q8N6U2 182 aa15.87■□□□□ 0.13
PKP3-210ENST00000533249 RXFP4Q8TDU9 374 aa15.87■□□□□ 0.13
PKP3-210ENST00000533249 SLC25A2Q9BXI2 301 aa15.87■□□□□ 0.13
PKP3-210ENST00000533249 LRP1BQ9NZR2 4599 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 SNURFLB1AK76 121 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 H3BQ15 152 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 STAG3L2P0CL84 134 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 STAG3L3P0CL85 134 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 HOXA5P20719 270 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 FGF8P55075 233 aaPredicted RBP15.86■□□□□ 0.13
PKP3-210ENST00000533249 IFITM2Q01629 132 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 KRTAP1-5Q9BYS1 174 aa15.86■□□□□ 0.13
PKP3-210ENST00000533249 TRAV12-3A0A0B4J271 114 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 ARL14EPLP0DKL9 152 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 IGLC2P0DOY2 106 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 UBE2L3P68036 154 aaKnown RBP15.85■□□□□ 0.13
PKP3-210ENST00000533249 TTC32Q5I0X7 151 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 SPATA12Q7Z6I5 190 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 MBD3L1Q8WWY6 194 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 TMEM14CQ9P0S9 112 aa15.85■□□□□ 0.13
PKP3-210ENST00000533249 OR10J4P0C629 311 aa15.84■□□□□ 0.13
PKP3-210ENST00000533249 CT45A10P0DMU9 189 aa15.84■□□□□ 0.13
PKP3-210ENST00000533249 PYYP10082 97 aa15.84■□□□□ 0.13
PKP3-210ENST00000533249 ZNF503Q96F45 646 aa15.84■□□□□ 0.13
PKP3-210ENST00000533249 FAM167A-AS1Q96KT0 104 aa15.84■□□□□ 0.13
PKP3-210ENST00000533249 HIST1H1EP10412 219 aaKnown RBP15.83■□□□□ 0.12
PKP3-210ENST00000533249 GCHFRP30047 84 aa15.83■□□□□ 0.12
PKP3-210ENST00000533249 LEPP41159 167 aa15.83■□□□□ 0.12
PKP3-210ENST00000533249 ESRGQ1W209 222 aa15.83■□□□□ 0.12
PKP3-210ENST00000533249 BLNKQ8WV28 456 aa15.83■□□□□ 0.12
PKP3-210ENST00000533249 PCNPQ8WW12 178 aaKnown RBP15.83■□□□□ 0.12
PKP3-210ENST00000533249 TMEM167BQ9NRX6 74 aa15.83■□□□□ 0.12
PKP3-210ENST00000533249 NPIPB6E9PJ23 425 aa15.82■□□□□ 0.12
PKP3-210ENST00000533249 Q9H3A6 140 aa15.82■□□□□ 0.12
PKP3-210ENST00000533249 TMPRSS5Q9H3S3 457 aa15.82■□□□□ 0.12
PKP3-210ENST00000533249 NBEAP1P0C6P0 100 aa15.81■□□□□ 0.12
PKP3-210ENST00000533249 GUK1Q16774 197 aa15.81■□□□□ 0.12
PKP3-210ENST00000533249 Q6ZTI0 123 aa15.81■□□□□ 0.12
PKP3-210ENST00000533249 TRAV1-1A0A0B4J248 108 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 PPT1P50897 306 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 ODF3Q96PU9 254 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 PYGO2Q9BRQ0 406 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 UPK3BQ9BT76 320 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 ZNF586Q9NXT0 402 aa15.8■□□□□ 0.12
PKP3-210ENST00000533249 MRPS16Q9Y3D3 137 aaKnown RBP15.8■□□□□ 0.12
PKP3-210ENST00000533249 H3BNG1 76 aa15.79■□□□□ 0.12
PKP3-210ENST00000533249 IFNA1P01562 189 aa15.79■□□□□ 0.12
PKP3-210ENST00000533249 FXYD5Q96DB9 178 aa15.79■□□□□ 0.12
PKP3-210ENST00000533249 DAZ2Q13117 558 aaKnown RBP15.78■□□□□ 0.12
PKP3-210ENST00000533249 GSN-AS1Q9NRJ2 163 aa15.78■□□□□ 0.12
PKP3-210ENST00000533249 M0R3E3 92 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 RGS13O14921 159 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 NMBP08949 121 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 KRTAP10-2P60368 255 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 ERCC8Q13216 396 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 GNG13Q9P2W3 67 aa15.77■□□□□ 0.12
PKP3-210ENST00000533249 TRBV19A0A075B6N1 114 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 TRGV2A0A075B6R0 118 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 A0A1W2PPQ1 181 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 C7orf71A4D174 169 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 UBE2G2P60604 165 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 CLLU1Q5K131 121 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 Q8N1X5 172 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 AAMDCQ9H7C9 122 aa15.76■□□□□ 0.11
PKP3-210ENST00000533249 APOBP04114 4563 aaKnown RBP15.75■□□□□ 0.11
PKP3-210ENST00000533249 ZNF253O75346 499 aa15.75■□□□□ 0.11
PKP3-210ENST00000533249 SLC25A5P05141 298 aaKnown RBP15.75■□□□□ 0.11
PKP3-210ENST00000533249 RANP62826 216 aaKnown RBP15.75■□□□□ 0.11
PKP3-210ENST00000533249 CCL20P78556 96 aa15.75■□□□□ 0.11
PKP3-210ENST00000533249 PDE6HQ13956 83 aa15.75■□□□□ 0.11
PKP3-210ENST00000533249 VSIG2Q96IQ7 327 aa15.75■□□□□ 0.11
PKP3-210ENST00000533249 MANBALQ9NQG1 85 aa15.75■□□□□ 0.11
PKP3-210ENST00000533249 A0A096LPF7 62 aa15.74■□□□□ 0.11
PKP3-210ENST00000533249 TRGV1A0A0A0MS02 117 aa15.74■□□□□ 0.11
PKP3-210ENST00000533249 BTN1A1Q13410 526 aa15.74■□□□□ 0.11
PKP3-210ENST00000533249 CST9LP1Q5W188 147 aa15.74■□□□□ 0.11
PKP3-210ENST00000533249 MRPL53Q96EL3 112 aaKnown RBP15.74■□□□□ 0.11
PKP3-210ENST00000533249 SCRT2Q9NQ03 307 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms