RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 MSRB1Q9NZV6 116 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 U3KQA8 63 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 A0A0J9YY99 117 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 J3QLI3 93 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 CCL3P10147 92 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 LEAP2Q969E1 77 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 PRR25Q96S07 402 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 VKORC1Q9BQB6 163 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 LINC00527Q9UJ94 153 aa6.04□□□□□ -1.44
PTPRK-219ENST00000531050 IGHV3-33P01772 117 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 ORM1P02763 201 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 ZNF883P0CG24 379 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 SAA2P0DJI9 122 aaPredicted RBP6.03□□□□□ -1.44
PTPRK-219ENST00000531050 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
PTPRK-219ENST00000531050 EDDM3AQ14507 147 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 IGHV5-10-1A0A0J9YXX1 117 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 E7EUB6 86 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 SH2D1AO60880 128 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 COX7CP15954 63 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 SRSF2Q01130 221 aaKnown RBP6.03□□□□□ -1.44
PTPRK-219ENST00000531050 ATXN8Q156A1 80 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 DEFB121Q5J5C9 76 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 Q6ZS46 218 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 KLHL30-AS1Q8NEE0 82 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 LINC00477Q96M19 166 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 DEFB126Q9BYW3 111 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 NDUFA4L2Q9NRX3 87 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 LAMA1P25391 3075 aa6.03□□□□□ -1.44
PTPRK-219ENST00000531050 IGKV1-16P04430 117 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 DUX4L9Q6RFH8 374 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-219ENST00000531050 CXorf67Q86X51 503 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-219ENST00000531050 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 PRUNE2Q8WUY3 3088 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 TRAV17A0A0B4J275 112 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 LAGE3Q14657 143 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 PCOLCEQ15113 449 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 RPS19BP1Q86WX3 136 aaKnown RBP6.02□□□□□ -1.45
PTPRK-219ENST00000531050 WDFY3Q8IZQ1 3526 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 NBEAQ8NFP9 2946 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 SVILO95425 2214 aa6.02□□□□□ -1.45
PTPRK-219ENST00000531050 INTS1Q8N201 2190 aaKnown RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 hADV29S1A0JD25 119 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 IGHV4-39P01824 125 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 SAA1P0DJI8 122 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 ERHP84090 104 aaKnown RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 WT1-ASQ06250 92 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 TCF15Q12870 199 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 CD177Q8N6Q3 437 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 TMEM263Q8WUH6 116 aaKnown RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 PSMG3-AS1Q96PY0 264 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 TMEM14CQ9P0S9 112 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 CGB1A6NKQ9 187 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 MRPL33O75394 65 aaKnown RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 ATP5G1P05496 136 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 C2orf82Q6UX34 121 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 KLF14Q8TD94 323 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-219ENST00000531050 SAP25Q8TEE9 199 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 C17orf77Q96MU5 243 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 SPANXDQ9BXN6 97 aa6.01□□□□□ -1.45
PTPRK-219ENST00000531050 SDK1Q7Z5N4 2213 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 A0A0G2JNJ9 132 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 EGR2P11161 476 aaPredicted RBP6□□□□□ -1.45
PTPRK-219ENST00000531050 PRDX2P32119 198 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 DSCR8Q96T75 97 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 Q9UFV3 132 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 CACNA1EQ15878 2313 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 MYO15AQ9UKN7 3530 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 H7C2G1 150 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 H7C423 109 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 TMEM170BQ5T4T1 132 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 SIGLEC15Q6ZMC9 328 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 DEFB123Q8N688 67 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 SLC25A29Q8N8R3 303 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 SMCR5Q8TEV8 140 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 TMEM190Q8WZ59 177 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 METTL26Q96S19 204 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 JPT2Q9H910 190 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 RPUSD1Q9UJJ7 312 aaKnown RBP6□□□□□ -1.45
PTPRK-219ENST00000531050 SIT1Q9Y3P8 196 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 FREM1Q5H8C1 2179 aa6□□□□□ -1.45
PTPRK-219ENST00000531050 TRBV19A0A075B6N1 114 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 IGHV1-45A0A0A0MS14 117 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 MALP21145 153 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 DLX6P56179 175 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 TMEM258P61165 79 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 NRACQ8N912 160 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 PRO0628Q9UI54 55 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 SDK2Q58EX2 2172 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 TRAV41A0A0B4J266 112 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 K7ENP7 123 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 TRACP01848 142 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 COX6A1P12074 109 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 HERVK_113P61574 105 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 C10orf55Q5SWW7 151 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 PYGO1Q9Y3Y4 419 aa5.99□□□□□ -1.45
PTPRK-219ENST00000531050 PI4KAP42356 2102 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms