RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
CD44-224ENST00000526669 CSNK1G2-AS1Q8NCQ2 148 aa9.98□□□□□ -0.81
CD44-224ENST00000526669 KLF12Q9Y4X4 402 aa9.98□□□□□ -0.81
CD44-224ENST00000526669 KLLNB2CW77 178 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 SPRY2O43597 315 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 PRM2P04554 102 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 Q6ZWC4 215 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 RNF183Q96D59 192 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 TM2D3Q9BRN9 247 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 TMEM208Q9BTX3 173 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 LENEPQ9Y5L5 61 aa9.97□□□□□ -0.81
CD44-224ENST00000526669 PGPEP1LA6NFU8 196 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
CD44-224ENST00000526669 TMEM250H0YL14 139 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 LTAP01374 205 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
CD44-224ENST00000526669 PEA15Q15121 130 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 SMUG1Q53HV7 270 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 CENPWQ5EE01 88 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 BAGE2Q86Y30 109 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 PARLQ9H300 379 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
CD44-224ENST00000526669 TGP01266 2768 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 TRBV6-1A0A0K0K1D8 114 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 GCGP01275 180 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
CD44-224ENST00000526669 HTN1P15515 57 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 TAS2R60P59551 318 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 COMMD7Q86VX2 200 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 LINC01587Q99440 93 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 NIPSNAP3BQ9BS92 247 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
CD44-224ENST00000526669 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 ZNF705GA8MUZ8 300 aaPredicted RBP9.94□□□□□ -0.82
CD44-224ENST00000526669 MUC21Q5SSG8 566 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 SAPCD1Q5SSQ6 148 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 NAGKQ9UJ70 344 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 X6R8D5 127 aa9.94□□□□□ -0.82
CD44-224ENST00000526669 MUC4Q99102 2169 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 ZNF324O75467 553 aaPredicted RBP9.93□□□□□ -0.82
CD44-224ENST00000526669 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 MGST1P10620 155 aaKnown RBP9.93□□□□□ -0.82
CD44-224ENST00000526669 GNG4P50150 75 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 Q6AWC8 147 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 PRR27Q6MZM9 219 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 ZNF705AQ6ZN79 300 aaPredicted RBP9.93□□□□□ -0.82
CD44-224ENST00000526669 TMEM183AQ8IXX5 376 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 SMIM7Q9BQ49 75 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 TP53TG1Q9Y2A0 90 aa9.93□□□□□ -0.82
CD44-224ENST00000526669 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
CD44-224ENST00000526669 DEFB4AO15263 64 aa9.92□□□□□ -0.82
CD44-224ENST00000526669 TMEM256Q8N2U0 113 aa9.92□□□□□ -0.82
CD44-224ENST00000526669 C20orf144Q9BQM9 153 aa9.92□□□□□ -0.82
CD44-224ENST00000526669 NACAE9PAV3 2078 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 TRAV21A0A0B4J279 112 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 H7BYZ3 331 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 SH2D1AO60880 128 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
CD44-224ENST00000526669 AZU1P20160 251 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 CRIP1P50238 77 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 OR5I1Q13606 314 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 MLST8Q9BVC4 326 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 TP53TG3Q9ULZ0 132 aa9.91□□□□□ -0.82
CD44-224ENST00000526669 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 IGHV4-28A0A0C4DH34 117 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 C9JCJ5 164 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
CD44-224ENST00000526669 SFTA3P0C7M3 94 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 NHLRC4P0CG21 123 aaPredicted RBP9.9□□□□□ -0.82
CD44-224ENST00000526669 RRN3P1Q2M238 152 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 ANXA2RQ3ZCQ2 193 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
CD44-224ENST00000526669 DNAH7Q8WXX0 4024 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 CBY3A6NI87 242 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 K7EN84 100 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 M0R036 132 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 EMP1P54849 157 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 FAM162BQ5T6X4 162 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 EIF4E3Q8N5X7 224 aaKnown RBP9.89□□□□□ -0.83
CD44-224ENST00000526669 Q8NAQ8 132 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
CD44-224ENST00000526669 TMSB15BA0A087X1C1 80 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 ORM1P02763 201 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 MIFP14174 115 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 FAM159AQ6UWV7 190 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
CD44-224ENST00000526669 NEU1Q99519 415 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms