RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 Q8TAT8 98 aa12.36□□□□□ -0.43
NR1H3-228ENST00000525441 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
NR1H3-228ENST00000525441 LENEPQ9Y5L5 61 aa12.36□□□□□ -0.43
NR1H3-228ENST00000525441 RGS13O14921 159 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
NR1H3-228ENST00000525441 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 TPT1P13693 172 aaKnown RBP12.35□□□□□ -0.43
NR1H3-228ENST00000525441 DAZ2Q13117 558 aaKnown RBP12.35□□□□□ -0.43
NR1H3-228ENST00000525441 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
NR1H3-228ENST00000525441 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
NR1H3-228ENST00000525441 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
NR1H3-228ENST00000525441 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
NR1H3-228ENST00000525441 RPH3ALQ9UNE2 315 aa12.34□□□□□ -0.43
NR1H3-228ENST00000525441 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
NR1H3-228ENST00000525441 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GAGE7O76087 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 RNF212Q495C1 297 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 PRR9Q5T870 116 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
NR1H3-228ENST00000525441 CXorf1O96002 111 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 GCHFRP30047 84 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 IBA57Q5T440 356 aaKnown RBP12.32□□□□□ -0.44
NR1H3-228ENST00000525441 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 C11orf72Q8NBR9 251 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 TMEM167BQ9NRX6 74 aa12.32□□□□□ -0.44
NR1H3-228ENST00000525441 EPPK1P58107 5090 aaKnown RBP12.31□□□□□ -0.44
NR1H3-228ENST00000525441 TCL1AP56279 114 aa12.31□□□□□ -0.44
NR1H3-228ENST00000525441 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 NUDT3O95989 172 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 FAM3BP58499 235 aaPredicted RBP12.3□□□□□ -0.44
NR1H3-228ENST00000525441 OR5I1Q13606 314 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 EIF5AL1Q6IS14 154 aaKnown RBP12.3□□□□□ -0.44
NR1H3-228ENST00000525441 Q6ZTI0 123 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 C5orf17Q8NAS9 161 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 ATG101Q9BSB4 218 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 DNAH6Q9C0G6 4158 aa12.3□□□□□ -0.44
NR1H3-228ENST00000525441 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 K7EQM0 130 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 ZNF415Q09FC8 603 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 AKR1C8PQ5T2L2 129 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 Q6AWC8 147 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 IQCF2Q8IXL9 164 aa12.29□□□□□ -0.44
NR1H3-228ENST00000525441 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 GNG5P63218 68 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 Q6ZQT7 251 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 C18orf15Q96N68 181 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 NDFIP1Q9BT67 221 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 KLF12Q9Y4X4 402 aa12.28□□□□□ -0.44
NR1H3-228ENST00000525441 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 UMAD1C9J7I0 102 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 SPINK4O60575 86 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 LGALS9BQ3B8N2 356 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 TMPRSS5Q9H3S3 457 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 TREM1Q9NP99 234 aa12.27□□□□□ -0.45
NR1H3-228ENST00000525441 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
NR1H3-228ENST00000525441 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
NR1H3-228ENST00000525441 TCRAP04437 139 aa12.26□□□□□ -0.45
NR1H3-228ENST00000525441 CCL18P55774 89 aa12.26□□□□□ -0.45
NR1H3-228ENST00000525441 SUMO1P63165 101 aaKnown RBP12.26□□□□□ -0.45
NR1H3-228ENST00000525441 BIRC6Q9NR09 4857 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 H3BNG1 76 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 M0R2N4 97 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 HOXA5P20719 270 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 SULT1A2P50226 295 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 RAB5CP51148 216 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
NR1H3-228ENST00000525441 IGLV2-18A0A075B6J9 118 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 A0A0J9YY99 117 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 FBLL1A6NHQ2 334 aaKnown RBP12.24□□□□□ -0.45
NR1H3-228ENST00000525441 GGTLC3B5MD39 225 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 LINC00336Q6ZUF6 198 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 CYB561D1Q8N8Q1 229 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 SPXQ9BT56 116 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
NR1H3-228ENST00000525441 EPDR1Q9UM22 224 aa12.24□□□□□ -0.45
NR1H3-228ENST00000525441 F6UZH7 168 aa12.23□□□□□ -0.45
NR1H3-228ENST00000525441 TEX261Q6UWH6 196 aa12.23□□□□□ -0.45
NR1H3-228ENST00000525441 ALKAL2Q6UX46 152 aa12.23□□□□□ -0.45
NR1H3-228ENST00000525441 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms