RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 ERCC8Q13216 396 aa8.26□□□□□ -1.09
SPIDR-222ENST00000524006 Q6YL49 198 aa8.26□□□□□ -1.09
SPIDR-222ENST00000524006 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
SPIDR-222ENST00000524006 ALKBH7Q9BT30 221 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-222ENST00000524006 F2Z2F3 143 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 HOXA3O43365 443 aaPredicted RBP8.25□□□□□ -1.09
SPIDR-222ENST00000524006 FSHBP01225 129 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 RAB4AP20338 218 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 DEFA6Q01524 100 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 CFHR3Q02985 330 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 FOXE3Q13461 319 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 UNQ9165/PRO28630Q6UXU0 137 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 LCNL1Q6ZST4 164 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 IL17RELQ6ZVW7 336 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 COX8CQ7Z4L0 72 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 KLK15Q9H2R5 256 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 NRN1Q9NPD7 142 aa8.25□□□□□ -1.09
SPIDR-222ENST00000524006 C20orf202A1L168 122 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 K7EMT4 169 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 SMAD7O15105 426 aaKnown RBP8.24□□□□□ -1.09
SPIDR-222ENST00000524006 GPX1P07203 203 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 ELANEP08246 267 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 CTRLP40313 264 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 FOXA3P55318 350 aaPredicted RBP8.24□□□□□ -1.09
SPIDR-222ENST00000524006 SCGB2A2Q13296 93 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 TWIST1Q15672 202 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
SPIDR-222ENST00000524006 RCHY1Q96PM5 261 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 RHPN1-AS1Q9BWJ2 59 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 PRO1933Q9H354 126 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 PPP1R14DQ9NXH3 145 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 TP53TG3Q9ULZ0 132 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 LENEPQ9Y5L5 61 aa8.24□□□□□ -1.09
SPIDR-222ENST00000524006 IGKV3-7A0A075B6H7 116 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 NUPR1O60356 82 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 LGALS1P09382 135 aaKnown RBP8.23□□□□□ -1.09
SPIDR-222ENST00000524006 PSMB8P28062 276 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 SSTP61278 116 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 TM4SF20Q53R12 229 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 KHDC1LQ5JSQ8 128 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 Q6ZS46 218 aa8.23□□□□□ -1.09
SPIDR-222ENST00000524006 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 CRIP1P50238 77 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 LINC00310P59036 64 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 Q6ZWC4 215 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 GATD1Q8NB37 220 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 PRDM13Q9H4Q3 707 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 SMPXQ9UHP9 88 aa8.22□□□□□ -1.09
SPIDR-222ENST00000524006 INAFM1C9JVW0 142 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
SPIDR-222ENST00000524006 DDTP30046 118 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 CACNG7P62955 275 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 ORMDL3Q8N138 153 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 FAM19A2Q8N3H0 131 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
SPIDR-222ENST00000524006 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 CSN3P07498 182 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-222ENST00000524006 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
SPIDR-222ENST00000524006 PRR31Q5SQ13 230 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 REC114Q7Z4M0 266 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 NIT1Q86X76 327 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 DPF1Q92782 380 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 PRELID3AQ96N28 172 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
SPIDR-222ENST00000524006 TIMM8BQ9Y5J9 83 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-222ENST00000524006 TMEM213A2RRL7 107 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 J3KRW8 73 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 OR5AL1P0C617 328 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
SPIDR-222ENST00000524006 CKS2P33552 79 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 LEPP41159 167 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 WFDC3Q8IUB2 231 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 OR8A1Q8NGG7 326 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 C20orf173Q96LM9 149 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 UBE2E2Q96LR5 201 aa8.19□□□□□ -1.1
SPIDR-222ENST00000524006 MUC21A0A0G2JKD1 596 aa8.18□□□□□ -1.1
SPIDR-222ENST00000524006 MUC21A0A140T8X8 626 aa8.18□□□□□ -1.1
SPIDR-222ENST00000524006 D6R8Y8 96 aa8.18□□□□□ -1.1
SPIDR-222ENST00000524006 LEPROTL1O95214 131 aa8.18□□□□□ -1.1
SPIDR-222ENST00000524006 PPBPP02775 128 aa8.18□□□□□ -1.1
SPIDR-222ENST00000524006 LINC00614P0C842 121 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms