RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
TSNARE1-202ENST00000518720 DERL1Q9BUN8 251 aa12.47□□□□□ -0.41
TSNARE1-202ENST00000518720 MED9Q9NWA0 146 aa12.47□□□□□ -0.41
TSNARE1-202ENST00000518720 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
TSNARE1-202ENST00000518720 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
TSNARE1-202ENST00000518720 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
TSNARE1-202ENST00000518720 RPL35P42766 123 aaKnown RBP12.46□□□□□ -0.41
TSNARE1-202ENST00000518720 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
TSNARE1-202ENST00000518720 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.41
TSNARE1-202ENST00000518720 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
TSNARE1-202ENST00000518720 LINC01587Q99440 93 aa12.45□□□□□ -0.42
TSNARE1-202ENST00000518720 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
TSNARE1-202ENST00000518720 HTN1P15515 57 aa12.44□□□□□ -0.42
TSNARE1-202ENST00000518720 ZNF674Q2M3X9 581 aa12.44□□□□□ -0.42
TSNARE1-202ENST00000518720 SMUG1Q53HV7 270 aa12.44□□□□□ -0.42
TSNARE1-202ENST00000518720 SAPCD1Q5SSQ6 148 aa12.44□□□□□ -0.42
TSNARE1-202ENST00000518720 NHLRC2Q8NBF2 726 aa12.44□□□□□ -0.42
TSNARE1-202ENST00000518720 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 RGS13O14921 159 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 GCGP01275 180 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 LTAP01374 205 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 ZNF705AQ6ZN79 300 aaPredicted RBP12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 Q6ZQT7 251 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 TMEM256Q8N2U0 113 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 NAGKQ9UJ70 344 aa12.43□□□□□ -0.42
TSNARE1-202ENST00000518720 RAB19A4D1S5 217 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 TMEM250H0YL14 139 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 H7BYZ3 331 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 TAS2R60P59551 318 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 PEA15Q15121 130 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 X6R8D5 127 aa12.42□□□□□ -0.42
TSNARE1-202ENST00000518720 PRM2P04554 102 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 SRP19P09132 144 aaKnown RBP12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 GNG4P50150 75 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 MUC21Q5SSG8 566 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 Q6AWC8 147 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 PARLQ9H300 379 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 U3KQK5 164 aa12.41□□□□□ -0.42
TSNARE1-202ENST00000518720 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 DEFB4AO15263 64 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 MIFP14174 115 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 RRN3P1Q2M238 152 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 TMEM183AQ8IXX5 376 aa12.4□□□□□ -0.42
TSNARE1-202ENST00000518720 TGP01266 2768 aa12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 C9JQL5 133 aa12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 MGST1P10620 155 aaKnown RBP12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 Q8NAQ8 132 aa12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 PYGO2Q9BRQ0 406 aa12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 TENM3Q9P273 2699 aa12.39□□□□□ -0.43
TSNARE1-202ENST00000518720 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
TSNARE1-202ENST00000518720 PFN1P07737 140 aaKnown RBP12.38□□□□□ -0.43
TSNARE1-202ENST00000518720 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
TSNARE1-202ENST00000518720 NEU1Q99519 415 aa12.38□□□□□ -0.43
TSNARE1-202ENST00000518720 SMIM7Q9BQ49 75 aa12.38□□□□□ -0.43
TSNARE1-202ENST00000518720 TRBV20OR9-2A0A075B6H5 130 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 CBY3A6NI87 242 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 SH2D1AO60880 128 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 NDUFS6O75380 124 aaKnown RBP12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 AZU1P20160 251 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 EMP1P54849 157 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 FAM162BQ5T6X4 162 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 FAM159AQ6UWV7 190 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
TSNARE1-202ENST00000518720 ZNF727A8MUV8 499 aa12.36□□□□□ -0.43
TSNARE1-202ENST00000518720 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
TSNARE1-202ENST00000518720 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
TSNARE1-202ENST00000518720 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
TSNARE1-202ENST00000518720 SMDT1Q9H4I9 107 aa12.36□□□□□ -0.43
TSNARE1-202ENST00000518720 C9JCJ5 164 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 COX8CQ7Z4L0 72 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 C16orf74Q96GX8 76 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 TP53TG3Q9ULZ0 132 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
TSNARE1-202ENST00000518720 FABP5P3A8MUU1 101 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 CRIP1P50238 77 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 SMIM12Q96EX1 92 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 SDF2L1Q9HCN8 221 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
TSNARE1-202ENST00000518720 M0R036 132 aa12.33□□□□□ -0.44
TSNARE1-202ENST00000518720 ORM1P02763 201 aa12.33□□□□□ -0.44
TSNARE1-202ENST00000518720 RNASE8Q8TDE3 154 aaKnown RBP12.33□□□□□ -0.44
TSNARE1-202ENST00000518720 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms