RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SRP9P49458 86 aaKnown RBP0.81□□□□□ -2.28
SQLE-202ENST00000518604 AKR1D1P51857 326 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 NDUFA6P56556 154 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 MRPS36P82909 103 aaKnown RBP0.81□□□□□ -2.28
SQLE-202ENST00000518604 SPRNQ5BIV9 151 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 TMEM91Q6ZNR0 172 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 OR5AS1Q8N127 324 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 Q8N6K4 173 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 PLPP5Q8NEB5 264 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 OR4B1Q8NGF8 309 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 TCEAL4Q96EI5 215 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 LINC00052Q96N35 136 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 TNFSF18Q9UNG2 199 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 DNAJC15Q9Y5T4 150 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 SOGA1O94964 1423 aa0.81□□□□□ -2.28
SQLE-202ENST00000518604 LAMA4Q16363 1823 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 ADGRB1O14514 1584 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 EML5Q05BV3 1969 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 PHRF1Q9P1Y6 1649 aaKnown RBP0.8□□□□□ -2.28
SQLE-202ENST00000518604 FAM236AA0A1B0GUQ0 79 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 FAM236BA0A1B0GV22 79 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 A0A1W2PPM0 123 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 K7EP13 123 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 ERC2-IT1O76042 136 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 CD3DP04234 171 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 IGLC6P0CF74 106 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 CXCL8P10145 99 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 EVI2AP22794 236 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 SNRPD3P62318 126 aaKnown RBP0.8□□□□□ -2.28
SQLE-202ENST00000518604 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 HSD17B12Q53GQ0 312 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 HAGHLQ6PII5 290 aaPredicted RBP0.8□□□□□ -2.28
SQLE-202ENST00000518604 FOXI2Q6ZQN5 318 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 OR4S1Q8NGB4 309 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 LZICQ8WZA0 190 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 SMIM3Q9BZL3 60 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 BANF2Q9H503 90 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 COPZ2Q9P299 210 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 TPRKBQ9Y3C4 175 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 SIP14410 1827 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 FOCADQ5VW36 1801 aa0.8□□□□□ -2.28
SQLE-202ENST00000518604 TNRC6AQ8NDV7 1962 aaKnown RBP0.79□□□□□ -2.28
SQLE-202ENST00000518604 E9PCH4 1651 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 CTTNBP2Q8WZ74 1663 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 KIDINS220Q9ULH0 1771 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 IGLV3-32A0A0A0MS00 114 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 LYRM1O43325 122 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 PITX3O75364 302 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 SAA1P0DJI8 122 aaPredicted RBP0.79□□□□□ -2.28
SQLE-202ENST00000518604 TPT1P13693 172 aaKnown RBP0.79□□□□□ -2.28
SQLE-202ENST00000518604 BLCAPP62952 87 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 TEN1Q86WV5 123 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 GKN2Q86XP6 184 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 OTOSQ8NHW6 89 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 ERG28Q9UKR5 140 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 LSM2Q9Y333 95 aaKnown RBP0.79□□□□□ -2.28
SQLE-202ENST00000518604 PTPRFP10586 1907 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 PTPRGP23470 1445 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 MYOM3Q5VTT5 1437 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 FGD6Q6ZV73 1430 aa0.79□□□□□ -2.28
SQLE-202ENST00000518604 ANK1P16157 1881 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 HELZP42694 1942 aaKnown RBP0.78□□□□□ -2.28
SQLE-202ENST00000518604 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.78□□□□□ -2.28
SQLE-202ENST00000518604 TRACP01848 142 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 COX4I1P13073 169 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 HLA-DRB4P13762 266 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 DNAJB13P59910 316 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 TSTD1Q8NFU3 115 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 TET1Q8NFU7 2136 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 ZNF431Q8TF32 576 aaPredicted RBP0.78□□□□□ -2.28
SQLE-202ENST00000518604 CST11Q9H112 138 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 LPAR5Q9H1C0 372 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 COMMD3Q9UBI1 195 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 METTL1Q9UBP6 276 aaKnown RBP0.78□□□□□ -2.28
SQLE-202ENST00000518604 HLA-DRB4X5D2U9 266 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 CCDC171Q6TFL3 1326 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 DISP2A7MBM2 1401 aa0.78□□□□□ -2.28
SQLE-202ENST00000518604 TRPM7Q96QT4 1865 aa0.78□□□□□ -2.29
SQLE-202ENST00000518604 LOC107986453A0A1B0GWG9 222 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 C5orf58C9J3I9 102 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 M0R129 80 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 EFNA4P52798 201 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 RPS25P62851 125 aaKnown RBP0.77□□□□□ -2.29
SQLE-202ENST00000518604 ASB16-AS1Q495Z4 193 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 CCDC58Q4VC31 144 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 IZUMO2Q6UXV1 221 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 SBSPONQ8IVN8 264 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 OR5AK2Q8NH90 309 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 SDF2Q99470 211 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 PFDN5Q99471 154 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 LIMD2Q9BT23 127 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 SLC35B3Q9H1N7 401 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 MPC1Q9Y5U8 109 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 BCL9LQ86UU0 1499 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 LRP5O75197 1615 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 MYH6P13533 1939 aa0.77□□□□□ -2.29
SQLE-202ENST00000518604 MYO18AQ92614 2054 aaKnown RBP0.77□□□□□ -2.29
SQLE-202ENST00000518604 CASP8AP2Q9UKL3 1982 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 MYH13Q9UKX3 1938 aa0.76□□□□□ -2.29
SQLE-202ENST00000518604 ERCC6Q03468 1493 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms