RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF266Q14584 549 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 C6orf223Q8N319 242 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 RYR1P21817 5038 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 DIRC3C9JPN6 131 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 EIF3GO75821 320 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 MED14OSP0DP75 135 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 ACOT6Q3I5F7 207 aaPredicted RBP7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 Q6AWC8 147 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 PQLC2Q6ZP29 291 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 TMED6Q8WW62 240 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 VSIG2Q96IQ7 327 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 ARPC5LQ9BPX5 153 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 OTORQ9NRC9 128 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 MRPS16Q9Y3D3 137 aaKnown RBP7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 LENEPQ9Y5L5 61 aa7.24□□□□□ -1.25
HMGXB3-205ENST00000514469 A0A096LPF7 62 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 RAB2AP61019 212 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 ESRGQ1W209 222 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 KRTAP1-5Q9BYS1 174 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 Q9H8V8 135 aa7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 MRPL16Q9NX20 251 aaKnown RBP7.23□□□□□ -1.25
HMGXB3-205ENST00000514469 TNP2Q05952 138 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 TTC32Q5I0X7 151 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 ARL6IP6Q8N6S5 226 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 OR10G4Q8NGN3 311 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 OR10G9Q8NGN4 311 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 OR10G7Q8NGN6 311 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 OR2G3Q8NGZ4 309 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 AQP10Q96PS8 301 aa7.22□□□□□ -1.25
HMGXB3-205ENST00000514469 A0A1W2PPQ1 181 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 A0A1W2PPV4 95 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 PGPA6NDG6 321 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 FAM74A1Q5RGS3 127 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 MUC21Q5SSG8 566 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 CMTM2Q8TAZ6 248 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 PSMG3Q9BT73 122 aaPredicted RBP7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 RPH3ALQ9UNE2 315 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.26
HMGXB3-205ENST00000514469 TRGV11A0A075B6L2 103 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 IGHV3-53P01767 116 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 CDC34P49427 236 aaPredicted RBP7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 TDRG1Q3Y452 100 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 HSD17B11Q8NBQ5 300 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 SUN5Q8TC36 379 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 MED28Q9H204 178 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 PRO0255Q9UI72 69 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 ICOSQ9Y6W8 199 aa7.2□□□□□ -1.26
HMGXB3-205ENST00000514469 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 HMGB3O15347 200 aaKnown RBP7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 PAX4O43316 350 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 GIPP09681 153 aaPredicted RBP7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 BTF3P20290 206 aaKnown RBP7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 ATP6V0CP27449 155 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 CRYBA4P53673 196 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 GNG5P63218 68 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 SLAQ13239 276 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 FHL2Q14192 279 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 TMEM183BQ1AE95 376 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 FAM159AQ6UWV7 190 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 TMEM183AQ8IXX5 376 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 RASL10AQ92737 203 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 TVP23CQ96ET8 276 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 SPXQ9BT56 116 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 HSPG2P98160 4391 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 ABCA13Q86UQ4 5058 aa7.19□□□□□ -1.26
HMGXB3-205ENST00000514469 TRAV21A0A0B4J279 112 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 SERTM2A0A1B0GWG4 89 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 RNF222A6NCQ9 220 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 F6UZH7 168 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 MBP02144 154 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 GCHFRP30047 84 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 SERF2P84101 59 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 Q5BKY6 102 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 IQCF2Q8IXL9 164 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 RAB24Q969Q5 203 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 C8orf49Q96NF6 230 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 SH3BGRL3Q9H299 93 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 HHLA3Q9XRX5 114 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 DNAH5Q8TE73 4624 aa7.18□□□□□ -1.26
HMGXB3-205ENST00000514469 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 IGHV3-16A0A0C4DH30 117 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 NXPH4O95158 308 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 TCRAP04437 139 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 TYMSP04818 313 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 SFTA3P0C7M3 94 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 C5orf17Q8NAS9 161 aa7.17□□□□□ -1.26
HMGXB3-205ENST00000514469 ZNF479Q96JC4 524 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms