RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 PATE1Q8WXA2 126 aa2.14□□□□□ -2.07
CHD1-205ENST00000508756 MAGOHBQ96A72 148 aaKnown RBP2.14□□□□□ -2.07
CHD1-205ENST00000508756 LINC00052Q96N35 136 aa2.14□□□□□ -2.07
CHD1-205ENST00000508756 METTL1Q9UBP6 276 aaKnown RBP2.14□□□□□ -2.07
CHD1-205ENST00000508756 TRPM7Q96QT4 1865 aa2.14□□□□□ -2.07
CHD1-205ENST00000508756 A6NN06 94 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 FREM3P0C091 2139 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 SPRNQ5BIV9 151 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 FAM74A1Q5RGS3 127 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 LINC00470Q9BZP3 86 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 SLC35B3Q9H1N7 401 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 ARHGAP31Q2M1Z3 1444 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 FGD6Q6ZV73 1430 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 PRG4Q92954 1404 aaPredicted RBP2.13□□□□□ -2.07
CHD1-205ENST00000508756 PTPRFP10586 1907 aa2.13□□□□□ -2.07
CHD1-205ENST00000508756 KLF7O75840 302 aaPredicted RBP2.12□□□□□ -2.07
CHD1-205ENST00000508756 ETV6P41212 452 aa2.12□□□□□ -2.07
CHD1-205ENST00000508756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.12□□□□□ -2.07
CHD1-205ENST00000508756 ARL11Q969Q4 196 aa2.12□□□□□ -2.07
CHD1-205ENST00000508756 CIB3Q96Q77 187 aaPredicted RBP2.12□□□□□ -2.07
CHD1-205ENST00000508756 ORMDL1Q9P0S3 153 aa2.12□□□□□ -2.07
CHD1-205ENST00000508756 HELZP42694 1942 aaKnown RBP2.12□□□□□ -2.07
CHD1-205ENST00000508756 ARFGEF3Q5TH69 2177 aa2.12□□□□□ -2.07
CHD1-205ENST00000508756 TNRC6AQ8NDV7 1962 aaKnown RBP2.11□□□□□ -2.07
CHD1-205ENST00000508756 FAM25AB3EWG3 89 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 FAM25CB3EWG5 89 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 FAM25GB3EWG6 89 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 TFF1P04155 84 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 SMIM7Q9BQ49 75 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 LIMD2Q9BT23 127 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 MPC1Q9Y5U8 109 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 SOX21Q9Y651 276 aaPredicted RBP2.11□□□□□ -2.07
CHD1-205ENST00000508756 UNC13CQ8NB66 2214 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 MYH6P13533 1939 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 MYH13Q9UKX3 1938 aa2.11□□□□□ -2.07
CHD1-205ENST00000508756 ROCK2O75116 1388 aaKnown RBP2.1□□□□□ -2.07
CHD1-205ENST00000508756 TNS3Q68CZ2 1445 aa2.1□□□□□ -2.07
CHD1-205ENST00000508756 USP54Q70EL1 1684 aa2.1□□□□□ -2.07
CHD1-205ENST00000508756 ZNF25P17030 456 aaPredicted RBP2.1□□□□□ -2.07
CHD1-205ENST00000508756 MIC13Q5XKP0 118 aa2.1□□□□□ -2.07
CHD1-205ENST00000508756 IZUMO2Q6UXV1 221 aa2.1□□□□□ -2.07
CHD1-205ENST00000508756 SDF2Q99470 211 aa2.1□□□□□ -2.07
CHD1-205ENST00000508756 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
CHD1-205ENST00000508756 NCOA3Q9Y6Q9 1424 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 MUC4Q99102 2169 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 CR1P17927 2039 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 F8W036 122 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 H3BRM9 83 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 CCL25O15444 150 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 DLEU1O43261 78 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 SELENOWP63302 87 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 SNX29P2Q8IUI4 249 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 ZNF563Q8TA94 476 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 ZNF431Q8TF32 576 aaPredicted RBP2.09□□□□□ -2.07
CHD1-205ENST00000508756 C4orf3Q8WVX3 66 aa2.09□□□□□ -2.07
CHD1-205ENST00000508756 EXPH5Q8NEV8 1989 aa2.09□□□□□ -2.08
CHD1-205ENST00000508756 ERCC6Q03468 1493 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 PEG3Q9GZU2 1588 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 A0A0G2JMM0 328 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 A0A1W2PPB8 328 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 KIR3DP1A8MWS1 328 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 RBP4P02753 201 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 IL7P13232 177 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 COX7CP15954 63 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 OR10AC1Q8NH08 325 aa2.08□□□□□ -2.08
CHD1-205ENST00000508756 CHD3Q12873 2000 aaKnown RBP2.08□□□□□ -2.08
CHD1-205ENST00000508756 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.08□□□□□ -2.08
CHD1-205ENST00000508756 KIF13AQ9H1H9 1805 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 SDK1Q7Z5N4 2213 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 LOC100130705A0A1B0GUX0 176 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 BBIP1A8MTZ0 92 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 HCRTO43612 131 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 PITX3O75364 302 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 IGF2P01344 180 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 IGKCP01834 107 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 EMX2Q04743 252 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 IQCJQ1A5X6 159 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 WFDC10AQ9H1F0 79 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 PHLPP1O60346 1717 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 PTPRGP23470 1445 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 CECR2Q9BXF3 1484 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 CASP8AP2Q9UKL3 1982 aa2.07□□□□□ -2.08
CHD1-205ENST00000508756 TENM1Q9UKZ4 2725 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 TRBV20-1A0A075B6N2 111 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 TRAV17A0A0B4J275 112 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 PNMA8CA0A1B0GUJ8 204 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 TPST1O60507 370 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 MRPS14O60783 128 aaKnown RBP2.06□□□□□ -2.08
CHD1-205ENST00000508756 NCR2O95944 276 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 PPYP01298 95 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 PLGLB1Q02325 96 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 CSAG1Q6PB30 78 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 OR10AG1Q8NH19 301 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 ZFP30Q9Y2G7 519 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 NOP16Q9Y3C1 178 aaKnown RBP2.06□□□□□ -2.08
CHD1-205ENST00000508756 EML5Q05BV3 1969 aa2.06□□□□□ -2.08
CHD1-205ENST00000508756 KDM6AO15550 1401 aaPredicted RBP2.06□□□□□ -2.08
CHD1-205ENST00000508756 LAMB2P55268 1798 aa2.05□□□□□ -2.08
CHD1-205ENST00000508756 TRAV23DV6A0A075B6W5 121 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms