RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TRBV7-9A0A0J9YWB2 115 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 HOXA3O43365 443 aaPredicted RBP13.38□□□□□ -0.27
SFXN1-208ENST00000507823 ZNF738Q8NE65 137 aa13.38□□□□□ -0.27
SFXN1-208ENST00000507823 APCP25054 2843 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 LINC00614P0C842 121 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 ZNF705DP0CH99 300 aaPredicted RBP13.37□□□□□ -0.27
SFXN1-208ENST00000507823 ZNF705BP0CI00 300 aaPredicted RBP13.37□□□□□ -0.27
SFXN1-208ENST00000507823 RAB4AP20338 218 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 KRTDAPP60985 99 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 FAM181BA6NEQ2 426 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 M0R2Z0 102 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 NTF3P20783 257 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 REC114Q7Z4M0 266 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
SFXN1-208ENST00000507823 C20orf144Q9BQM9 153 aa13.36□□□□□ -0.27
SFXN1-208ENST00000507823 TMEM191AQ9H0A3 160 aa13.36□□□□□ -0.27
SFXN1-208ENST00000507823 C2orf70A6NJV1 201 aa13.36□□□□□ -0.27
SFXN1-208ENST00000507823 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
SFXN1-208ENST00000507823 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
SFXN1-208ENST00000507823 PLA2G2AP14555 144 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 C14orf144Q96I85 54 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 KMT2BQ9UMN6 2715 aaPredicted RBP13.35□□□□□ -0.27
SFXN1-208ENST00000507823 LGALS9O00182 355 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 DEFA6Q01524 100 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 EBLN2Q6P2I7 272 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 TEX29Q8N6K0 151 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 OR10J6PQ8NGY7 276 aa13.35□□□□□ -0.27
SFXN1-208ENST00000507823 IGHV1-24A0A0C4DH33 117 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 M0QZ24 198 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 PRR9Q5T870 116 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 AMN1Q8IY45 258 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 DCANP1Q8TF63 244 aa13.34□□□□□ -0.27
SFXN1-208ENST00000507823 MRPL51Q4U2R6 128 aaKnown RBP13.33□□□□□ -0.28
SFXN1-208ENST00000507823 OR8A1Q8NGG7 326 aa13.33□□□□□ -0.28
SFXN1-208ENST00000507823 IGHV4-4A0A075B6R2 117 aa13.33□□□□□ -0.28
SFXN1-208ENST00000507823 CRXO43186 299 aaPredicted RBP13.33□□□□□ -0.28
SFXN1-208ENST00000507823 SNAI2O43623 268 aa13.33□□□□□ -0.28
SFXN1-208ENST00000507823 TWIST1Q15672 202 aa13.33□□□□□ -0.28
SFXN1-208ENST00000507823 TDRG1Q3Y452 100 aa13.33□□□□□ -0.28
SFXN1-208ENST00000507823 EDN2P20800 178 aa13.32□□□□□ -0.28
SFXN1-208ENST00000507823 ORMDL3Q8N138 153 aa13.32□□□□□ -0.28
SFXN1-208ENST00000507823 D6R8Y8 96 aa13.32□□□□□ -0.28
SFXN1-208ENST00000507823 RNF185Q96GF1 192 aa13.32□□□□□ -0.28
SFXN1-208ENST00000507823 J3QKU1 62 aa13.31□□□□□ -0.28
SFXN1-208ENST00000507823 BTF3P20290 206 aaKnown RBP13.31□□□□□ -0.28
SFXN1-208ENST00000507823 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
SFXN1-208ENST00000507823 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
SFXN1-208ENST00000507823 PRELID3AQ96N28 172 aa13.31□□□□□ -0.28
SFXN1-208ENST00000507823 VAMP8Q9BV40 100 aa13.31□□□□□ -0.28
SFXN1-208ENST00000507823 ID1P41134 155 aa13.3□□□□□ -0.28
SFXN1-208ENST00000507823 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
SFXN1-208ENST00000507823 MSRB1Q9NZV6 116 aa13.3□□□□□ -0.28
SFXN1-208ENST00000507823 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 TRAV21A0A0B4J279 112 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 MUC21A0A0G2JKD1 596 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 MUC21A0A140T8X8 626 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 PPBPP02775 128 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 PMCHL1Q16048 86 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 MUC21Q5SSG8 566 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 AP5S1Q9NUS5 200 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 TEX15Q9BXT5 2789 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 LAMTOR2Q9Y2Q5 125 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 CHD6Q8TD26 2715 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 TENM4Q6N022 2769 aa13.29□□□□□ -0.28
SFXN1-208ENST00000507823 IGHV4OR15-8A0A075B7B6 117 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 A0A087WW49 117 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 CACNG7P62955 275 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 Q6ZQT7 251 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 TMEM70Q9BUB7 260 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 SIGLEC8Q9NYZ4 499 aa13.28□□□□□ -0.28
SFXN1-208ENST00000507823 LINC01546A6NGU7 62 aa13.27□□□□□ -0.28
SFXN1-208ENST00000507823 MED14OSP0DP75 135 aa13.27□□□□□ -0.28
SFXN1-208ENST00000507823 DEFB1P60022 68 aa13.27□□□□□ -0.29
SFXN1-208ENST00000507823 ODF3Q96PU9 254 aa13.27□□□□□ -0.29
SFXN1-208ENST00000507823 ITPR3Q14573 2671 aa13.27□□□□□ -0.29
SFXN1-208ENST00000507823 KLLNB2CW77 178 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 CSN3P07498 182 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 FA2HQ7L5A8 372 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 MS4A6AQ9H2W1 248 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 PAM16Q9Y3D7 125 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 F6UB75 175 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 K7EQG2 157 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-208ENST00000507823 CKS2P33552 79 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 OR10AG1Q8NH19 301 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 MIEN1Q9BRT3 115 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 ZNF469Q96JG9 3925 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-208ENST00000507823 SYS1-DBNDD2H3BUS1 97 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-208ENST00000507823 LINC00173Q6ZV60 143 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 SPATA12Q7Z6I5 190 aa13.26□□□□□ -0.29
SFXN1-208ENST00000507823 HSPB8Q9UJY1 196 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms