RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.63□□□□□ -1.83
NIPBL-205ENST00000505998 LFNGQ8NES3 379 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 OR10G4Q8NGN3 311 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 OR5B3Q8NH48 314 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 KIR2DL5BQ8NHK3 375 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 BTF3L4Q96K17 158 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 OR10C1Q96KK4 312 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 P2RX4Q99571 388 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 RASL11BQ9BPW5 248 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 SLC25A39Q9BZJ4 359 aaPredicted RBP3.63□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF286AQ9HBT8 521 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 FKBP11Q9NYL4 201 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 IDI2-AS1Q9NZ38 188 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 MRPS16Q9Y3D3 137 aaKnown RBP3.63□□□□□ -1.83
NIPBL-205ENST00000505998 MINOS1-NBL1R4GNA1 71 aa3.63□□□□□ -1.83
NIPBL-205ENST00000505998 SETD2Q9BYW2 2564 aaPredicted RBP3.62□□□□□ -1.83
NIPBL-205ENST00000505998 IGHV1-69DA0A0B4J2H0 117 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 H7BYZ3 331 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 INSP01308 110 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 IGHV1-69P01742 117 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 SCTP09683 121 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TRGC1P0CF51 173 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 C8orf88P0DMB2 117 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 PTHLHP12272 177 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TPT1P13693 172 aaKnown RBP3.62□□□□□ -1.83
NIPBL-205ENST00000505998 CD99P14209 185 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 CRISP2P16562 243 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 ATP6V0CP27449 155 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 RHOBP62745 196 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 AKR1C1Q04828 323 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM267Q0VDI3 215 aaPredicted RBP3.62□□□□□ -1.83
NIPBL-205ENST00000505998 EBI3Q14213 229 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 EDDM3AQ14507 147 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF266Q14584 549 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 MRPL23Q16540 153 aaKnown RBP3.62□□□□□ -1.83
NIPBL-205ENST00000505998 CT45A1Q5HYN5 189 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM78Q5T7P6 136 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF833PQ6ZTB9 187 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 NEGR1Q7Z3B1 354 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 VMO1Q7Z5L0 202 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 OR1L1Q8NH94 360 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 OR13C6PQ8NH95 151 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 CT45A3Q8NHU0 189 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 IL22RA2Q969J5 263 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM126AQ9H061 195 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 GTSF1LQ9H1H1 148 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 SPANXCQ9NY87 97 aa3.62□□□□□ -1.83
NIPBL-205ENST00000505998 NIPBLQ6KC79 2804 aaeCLIP3.62□□□□□ -1.83
NIPBL-205ENST00000505998 TET2Q6N021 2002 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ATRQ13535 2644 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 PLXNB1O43157 2135 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ANK2Q01484 3957 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 LOC102724200A0A096LPH7 203 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 BORCS7-ASMTA0A0B4J1R7 106 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 TRAV40A0A0B4J280 105 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 A0A0B4J2A0 478 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM189A5PLL7 270 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF736B4DX44 427 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 BUB1B-PAK6H3BSN5 160 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 HMGB3O15347 200 aaKnown RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF207O43670 478 aaKnown RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 PPYP01298 95 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 HLA-AP01891 365 aaKnown RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 CD3DP04234 171 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 AKAIN1P0CW23 69 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 SLC25A4P12235 298 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 PMCHP20382 165 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 HIST1H1AQ02539 215 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 UNQ5815/PRO19632Q6UWF5 114 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 TRAPPC6BQ86SZ2 158 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 FAM71E2Q8N5Q1 922 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 TMEM86BQ8N661 226 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 Q8N6K4 173 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 OR4C16Q8NGL9 310 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 DNAJC30Q96LL9 226 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 IMMP2LQ96T52 175 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 GINS3Q9BRX5 216 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 DERL1Q9BUN8 251 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF471Q9BX82 626 aaPredicted RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 PARP12Q9H0J9 701 aaKnown RBP3.61□□□□□ -1.83
NIPBL-205ENST00000505998 SMDT1Q9H4I9 107 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 ZNRD1Q9P1U0 126 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 XCL2Q9UBD3 114 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 SHPKQ9UHJ6 478 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 SIGLEC9Q9Y336 463 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 JMJD1CQ15652 2540 aa3.61□□□□□ -1.83
NIPBL-205ENST00000505998 A0A087WX48 190 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 IGKV1D-13A0A0B4J2D9 117 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF705FA8MVS1 300 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 K7EPK0 472 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 SDCBPO00560 298 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 NPFFO15130 113 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 IGLC1P0CG04 106 aa3.6□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF705DP0CH99 300 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 ZNF705BP0CI00 300 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 SAA2P0DJI9 122 aaPredicted RBP3.6□□□□□ -1.83
NIPBL-205ENST00000505998 IGKV1-13P0DP09 117 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms