RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 HIF1ANQ9NWT6 349 aa13.04□□□□□ -0.32
LIN54-204ENST00000505397 IGHV3OR16-8A0A075B7F1 116 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 CLPSL1A2RUU4 121 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 BOD1L2Q8IYS8 172 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 OR4C5Q8NGB2 326 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 PPBPP02775 128 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 FXYD7P58549 80 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 CACNG7P62955 275 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 ERCC8Q13216 396 aa13.03□□□□□ -0.32
LIN54-204ENST00000505397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.02□□□□□ -0.325e-8■■■■□ 22.3
LIN54-204ENST00000505397 IGHV3-35A0A0C4DH35 117 aa13.02□□□□□ -0.32
LIN54-204ENST00000505397 CLEC3BP05452 202 aa13.02□□□□□ -0.32
LIN54-204ENST00000505397 RBX1P62877 108 aa13.02□□□□□ -0.32
LIN54-204ENST00000505397 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.32
LIN54-204ENST00000505397 SVEP1Q4LDE5 3571 aa13.02□□□□□ -0.33
LIN54-204ENST00000505397 CENPEQ02224 2701 aa13.02□□□□□ -0.33
LIN54-204ENST00000505397 ORM1P02763 201 aa13.02□□□□□ -0.33
LIN54-204ENST00000505397 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.33
LIN54-204ENST00000505397 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
LIN54-204ENST00000505397 ATP6V0E1O15342 81 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 GATA3P23771 443 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 PRSS57Q6UWY2 283 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 SNAI2O43623 268 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 SEC11AP67812 179 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 ERASQ7Z444 233 aa13.01□□□□□ -0.33
LIN54-204ENST00000505397 CELSR2Q9HCU4 2923 aa13□□□□□ -0.33
LIN54-204ENST00000505397 ECSCRQ19T08 205 aa13□□□□□ -0.33
LIN54-204ENST00000505397 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
LIN54-204ENST00000505397 MOB4Q9Y3A3 225 aa13□□□□□ -0.33
LIN54-204ENST00000505397 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
LIN54-204ENST00000505397 CBY3A6NI87 242 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 GAS8-AS1O95177 125 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 IL17RELQ6ZVW7 336 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 LINC01356Q8N9X3 169 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 PTPN13Q12923 2485 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 SIVA1O15304 175 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 MEGF9Q9H1U4 602 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 POLQO75417 2590 aa12.99□□□□□ -0.33
LIN54-204ENST00000505397 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 SMAD7O15105 426 aaKnown RBP12.98□□□□□ -0.33
LIN54-204ENST00000505397 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 C5orf56Q8N8D9 126 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 PIFOQ8TCI5 191 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 BEX4Q9NWD9 120 aaPredicted RBP12.98□□□□□ -0.33
LIN54-204ENST00000505397 FBN2P35556 2912 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 OR9G4Q8NGQ1 327 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
LIN54-204ENST00000505397 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 MRPL53Q96EL3 112 aaKnown RBP12.97□□□□□ -0.33
LIN54-204ENST00000505397 PEF1Q9UBV8 284 aaKnown RBP12.97□□□□□ -0.33
LIN54-204ENST00000505397 U3KQE9 123 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 TRAV8-6A0A0B4J262 113 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 LINC01548A6NM66 108 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 FCER1GP30273 86 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
LIN54-204ENST00000505397 C11orf21Q9P2W6 132 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 C7orf71A4D174 169 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 G3V318 75 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 CLEC19AQ6UXS0 136 aa12.97□□□□□ -0.33
LIN54-204ENST00000505397 CHD6Q8TD26 2715 aa12.96□□□□□ -0.33
LIN54-204ENST00000505397 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.33
LIN54-204ENST00000505397 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
LIN54-204ENST00000505397 TRBV7-1A0A0A6YYK4 115 aa12.96□□□□□ -0.34
LIN54-204ENST00000505397 CDKN1BP46527 198 aa12.96□□□□□ -0.34
LIN54-204ENST00000505397 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.34
LIN54-204ENST00000505397 CSMD2Q7Z408 3487 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 IGLV2-18A0A075B6J9 118 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 ABCA12Q86UK0 2595 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 A0A096LNT2 108 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 LEPP41159 167 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 LRRC75A-AS1Q8N1F1 130 aa12.95□□□□□ -0.34
LIN54-204ENST00000505397 IGHV7-4-1A0A0J9YVY3 117 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 PRSS47A8MTI9 375 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 H3BUX3 64 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 TGFAP01135 160 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
LIN54-204ENST00000505397 HSD52Q0P140 79 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 LY6EQ16553 131 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 Q5PR19 223 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 ODF1Q14990 250 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 OR4X2Q8NGF9 303 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 METTL26Q96S19 204 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
LIN54-204ENST00000505397 DOPEY2Q9Y3R5 2298 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms