RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 DEFB130BP0DP73 79 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 DEFB130AP0DP74 79 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 TPT1P13693 172 aaKnown RBP17.9■□□□□ 0.46
PVT1-201ENST00000504719 FHITP49789 147 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 TMEM88Q6PEY1 159 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 ZNF493Q6ZR52 646 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 ZFAND2AQ8N6M9 145 aa17.9■□□□□ 0.46
PVT1-201ENST00000504719 RNASE8Q8TDE3 154 aaKnown RBP17.9■□□□□ 0.46
PVT1-201ENST00000504719 MAP1LC3B2A6NCE7 125 aa17.89■□□□□ 0.45
PVT1-201ENST00000504719 PRR9Q5T870 116 aa17.89■□□□□ 0.45
PVT1-201ENST00000504719 TMEM263Q8WUH6 116 aaKnown RBP17.89■□□□□ 0.45
PVT1-201ENST00000504719 MAP1LC3BQ9GZQ8 125 aa17.89■□□□□ 0.45
PVT1-201ENST00000504719 TIMM8BQ9Y5J9 83 aaPredicted RBP17.89■□□□□ 0.45
PVT1-201ENST00000504719 TRBV7-9A0A0J9YWB2 115 aa17.88■□□□□ 0.45
PVT1-201ENST00000504719 GGTLC3B5MD39 225 aa17.88■□□□□ 0.45
PVT1-201ENST00000504719 UMAD1C9J7I0 102 aa17.88■□□□□ 0.45
PVT1-201ENST00000504719 SUMO1P63165 101 aaKnown RBP17.88■□□□□ 0.45
PVT1-201ENST00000504719 C5orf17Q8NAS9 161 aa17.88■□□□□ 0.45
PVT1-201ENST00000504719 TMED6Q8WW62 240 aa17.88■□□□□ 0.45
PVT1-201ENST00000504719 ZNF324O75467 553 aaPredicted RBP17.87■□□□□ 0.45
PVT1-201ENST00000504719 STOML3Q8TAV4 291 aa17.87■□□□□ 0.45
PVT1-201ENST00000504719 PYGO2Q9BRQ0 406 aa17.87■□□□□ 0.45
PVT1-201ENST00000504719 TRAV8-1A0A0A6YYK1 113 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 A0A1W2PRE2 83 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 UBE2G2P60604 165 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 CCDC28AQ8IWP9 274 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 FAM213BQ8TBF2 198 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 LENEPQ9Y5L5 61 aa17.86■□□□□ 0.45
PVT1-201ENST00000504719 CBY3A6NI87 242 aa17.85■□□□□ 0.45
PVT1-201ENST00000504719 TCRAP04437 139 aa17.85■□□□□ 0.45
PVT1-201ENST00000504719 C15orf53Q8NAA6 179 aa17.85■□□□□ 0.45
PVT1-201ENST00000504719 NOP10Q9NPE3 64 aaKnown RBP17.85■□□□□ 0.45
PVT1-201ENST00000504719 Q6ZQT7 251 aa17.84■□□□□ 0.45
PVT1-201ENST00000504719 UBE2DNLQ8IWF7 75 aa17.84■□□□□ 0.45
PVT1-201ENST00000504719 EPDR1Q9UM22 224 aa17.84■□□□□ 0.45
PVT1-201ENST00000504719 NACAE9PAV3 2078 aa17.83■□□□□ 0.45
PVT1-201ENST00000504719 SERTM2A0A1B0GWG4 89 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 F5H768 121 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 ATP5G1P05496 136 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 ATP5G3P48201 142 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 SFT2D1Q8WV19 159 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 SGK494Q96LW2 274 aa17.83■□□□□ 0.44
PVT1-201ENST00000504719 RNF212Q495C1 297 aa17.82■□□□□ 0.44
PVT1-201ENST00000504719 DPPA3Q6W0C5 159 aa17.82■□□□□ 0.44
PVT1-201ENST00000504719 FAM74A7A6NL05 159 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 K7EQM0 130 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 ZFP69Q49AA0 526 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 LINC00612Q8N6U2 182 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 MBD3L1Q8WWY6 194 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 LINC00467Q9BRT7 94 aa17.81■□□□□ 0.44
PVT1-201ENST00000504719 RGS13O14921 159 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 IFNA7P01567 189 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 EIF5AL1Q6IS14 154 aaKnown RBP17.8■□□□□ 0.44
PVT1-201ENST00000504719 C9orf62Q8N4C0 152 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 EIF4E3Q8N5X7 224 aaKnown RBP17.8■□□□□ 0.44
PVT1-201ENST00000504719 CYB561D1Q8N8Q1 229 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 TVP23CQ96ET8 276 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 ATG101Q9BSB4 218 aa17.8■□□□□ 0.44
PVT1-201ENST00000504719 NKX6-2Q9C056 277 aaPredicted RBP17.8■□□□□ 0.44
PVT1-201ENST00000504719 A0A1B0GV50 99 aa17.79■□□□□ 0.44
PVT1-201ENST00000504719 M0R2N4 97 aa17.79■□□□□ 0.44
PVT1-201ENST00000504719 LGALS9BQ3B8N2 356 aa17.79■□□□□ 0.44
PVT1-201ENST00000504719 SLC51BQ86UW2 128 aa17.79■□□□□ 0.44
PVT1-201ENST00000504719 TREM1Q9NP99 234 aa17.79■□□□□ 0.44
PVT1-201ENST00000504719 IGHV1OR15-1A0A075B7D0 117 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 SNURFLB1AK76 121 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 H2AFB1P0C5Y9 115 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 ANXA2RQ3ZCQ2 193 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 Q6AWC8 147 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 PSG8Q9UQ74 426 aa17.78■□□□□ 0.44
PVT1-201ENST00000504719 F6UZH7 168 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 IGLV2-11P01706 119 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 ZNF680Q8NEM1 530 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 NDFIP1Q9BT67 221 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 TP53TG3Q9ULZ0 132 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 HECTD4Q9Y4D8 3996 aa17.77■□□□□ 0.44
PVT1-201ENST00000504719 FLI1Q01543 452 aaPredicted RBP17.76■□□□□ 0.43
PVT1-201ENST00000504719 MUC21Q5SSG8 566 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 LINC00336Q6ZUF6 198 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 TMEM75Q8N9X5 138 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 LINC00479Q96M42 142 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 DNAH2Q9P225 4427 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 DNAH17Q9UFH2 4485 aa17.76■□□□□ 0.43
PVT1-201ENST00000504719 IGLV2-18A0A075B6J9 118 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 PEX7O00628 323 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 RAB5CP51148 216 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 DAZ2Q13117 558 aaKnown RBP17.75■□□□□ 0.43
PVT1-201ENST00000504719 CST9LP1Q5W188 147 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 PRNTQ86SH4 94 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 C11orf72Q8NBR9 251 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 GSN-AS1Q9NRJ2 163 aa17.75■□□□□ 0.43
PVT1-201ENST00000504719 TRAV34A0A0B4J273 112 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 GAGE12BA1L429 117 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 PAGE4O60829 102 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 GAGE7O76087 117 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 NUDT3O95989 172 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 GAGE12FP0CL80 117 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 GAGE12GP0CL81 117 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 GAGE12IP0CL82 117 aa17.74■□□□□ 0.43
PVT1-201ENST00000504719 Q6ZR54 194 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms