RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 ZNF256Q9Y2P7 627 aaPredicted RBP18.19■□□□□ 0.5
PPP1R3F-205ENST00000495799 FAM231BA6NCW3 169 aa18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 CRISP2P16562 243 aa18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 RPS20P60866 119 aaKnown RBP18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 NAT8BQ9UHF3 227 aa18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 IZUMO1RA6ND01 250 aa18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 TMEM158Q8WZ71 300 aa18.18■□□□□ 0.5
PPP1R3F-205ENST00000495799 TMEM189A5PLL7 270 aa18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 CA1P00915 261 aaPredicted RBP18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 ZNF80P51504 273 aaPredicted RBP18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 C9orf66Q5T8R8 295 aa18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 GDF5OSQ5U4N7 250 aa18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 MCRIP2Q9BUT9 160 aaKnown RBP18.17■□□□□ 0.5
PPP1R3F-205ENST00000495799 GPX1P07203 203 aa18.16■□□□□ 0.5
PPP1R3F-205ENST00000495799 CD33P20138 364 aa18.16■□□□□ 0.5
PPP1R3F-205ENST00000495799 TSPOP30536 169 aa18.16■□□□□ 0.5
PPP1R3F-205ENST00000495799 APRG1Q8IVJ8 170 aa18.16■□□□□ 0.5
PPP1R3F-205ENST00000495799 ZFAND2AQ8N6M9 145 aa18.16■□□□□ 0.5
PPP1R3F-205ENST00000495799 TYMSP04818 313 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 HLA-DRB4P13762 266 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 TCL1AP56279 114 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 C12orf54Q6X4T0 127 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 C3orf56Q8N813 242 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 NEU1Q99519 415 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 HLA-DRB4X5D2U9 266 aa18.15■□□□□ 0.5
PPP1R3F-205ENST00000495799 TRAV21A0A0B4J279 112 aa18.14■□□□□ 0.49
PPP1R3F-205ENST00000495799 RPS10P46783 165 aaKnown RBP18.14■□□□□ 0.49
PPP1R3F-205ENST00000495799 Q6AWC8 147 aa18.14■□□□□ 0.49
PPP1R3F-205ENST00000495799 SHISA2Q6UWI4 295 aa18.14■□□□□ 0.49
PPP1R3F-205ENST00000495799 SETD2Q9BYW2 2564 aaPredicted RBP18.14■□□□□ 0.49
PPP1R3F-205ENST00000495799 OR11H12B2RN74 326 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 LINC01559Q495D7 138 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 FAM110AQ9BQ89 295 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 SRD5A3Q9H8P0 318 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 HIGD1CA8MV81 97 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 ORM1P02763 201 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 ACTL10Q5JWF8 245 aa18.13■□□□□ 0.49
PPP1R3F-205ENST00000495799 A8MTW9 85 aa18.12■□□□□ 0.49
PPP1R3F-205ENST00000495799 KLLNB2CW77 178 aa18.12■□□□□ 0.49
PPP1R3F-205ENST00000495799 COX19Q49B96 90 aa18.12■□□□□ 0.49
PPP1R3F-205ENST00000495799 WNK1Q9H4A3 2382 aa18.12■□□□□ 0.49
PPP1R3F-205ENST00000495799 ODF3L2Q3SX64 289 aa18.11■□□□□ 0.49
PPP1R3F-205ENST00000495799 NUP35Q8NFH5 326 aa18.11■□□□□ 0.49
PPP1R3F-205ENST00000495799 TMA7Q9Y2S6 64 aaKnown RBP18.11■□□□□ 0.49
PPP1R3F-205ENST00000495799 KNCNA6PVL3 124 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 H3BMM0 161 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 J3KRW8 73 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 CDKN1BP46527 198 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 FOXA3P55318 350 aaPredicted RBP18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 BEAN1Q3B7T3 259 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 PRR9Q5T870 116 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 ATP5L2Q7Z4Y8 100 aa18.1■□□□□ 0.49
PPP1R3F-205ENST00000495799 C1orf196B1AJZ1 125 aa18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 IGKV3-20P01619 116 aa18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 RNASE4P34096 147 aaKnown RBP18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 RASL11AQ6T310 242 aa18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 CLUHP3Q96NS8 147 aa18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 NIPBLQ6KC79 2804 aaeCLIP18.09■□□□□ 0.49
PPP1R3F-205ENST00000495799 GTSF1Q8WW33 167 aa18.08■□□□□ 0.49
PPP1R3F-205ENST00000495799 BORCS7Q96B45 105 aa18.08■□□□□ 0.49
PPP1R3F-205ENST00000495799 TMSB15BA0A087X1C1 80 aa18.08■□□□□ 0.48
PPP1R3F-205ENST00000495799 C7orf71A4D174 169 aa18.08■□□□□ 0.48
PPP1R3F-205ENST00000495799 GZMBP10144 247 aa18.08■□□□□ 0.48
PPP1R3F-205ENST00000495799 WDR73Q6P4I2 378 aa18.08■□□□□ 0.48
PPP1R3F-205ENST00000495799 AMTNQ6UX39 209 aa18.07■□□□□ 0.48
PPP1R3F-205ENST00000495799 STHQ8IWL8 128 aa18.07■□□□□ 0.48
PPP1R3F-205ENST00000495799 WFDC9Q8NEX5 89 aa18.07■□□□□ 0.48
PPP1R3F-205ENST00000495799 PGLYRP4Q96LB8 373 aa18.07■□□□□ 0.48
PPP1R3F-205ENST00000495799 JMJD1CQ15652 2540 aa18.06■□□□□ 0.48
PPP1R3F-205ENST00000495799 RAB5BP61020 215 aa18.06■□□□□ 0.48
PPP1R3F-205ENST00000495799 SPINK4O60575 86 aa18.05■□□□□ 0.48
PPP1R3F-205ENST00000495799 MRPL54Q6P161 138 aaKnown RBP18.05■□□□□ 0.48
PPP1R3F-205ENST00000495799 IGKV3D-20A0A0C4DH25 116 aa18.04■□□□□ 0.48
PPP1R3F-205ENST00000495799 MT-ND6P03923 174 aa18.04■□□□□ 0.48
PPP1R3F-205ENST00000495799 SPINK13Q1W4C9 94 aa18.04■□□□□ 0.48
PPP1R3F-205ENST00000495799 FER1L6-AS1Q8NA97 138 aa18.04■□□□□ 0.48
PPP1R3F-205ENST00000495799 AMBPP02760 352 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 ZNF124Q15973 351 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 GNB1LQ9BYB4 327 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 NAGKQ9UJ70 344 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 A0A1B0GW15 77 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 M0R2Z0 102 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 S100A8P05109 93 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 RIGQ13278 110 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 GFI1BQ5VTD9 330 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 KCNS1Q96KK3 526 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 C11orf21Q9P2W6 132 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 TRAPPC1Q9Y5R8 145 aa18.03■□□□□ 0.48
PPP1R3F-205ENST00000495799 A0A1B0GUT8 65 aa18.02■□□□□ 0.47
PPP1R3F-205ENST00000495799 HBBP68871 147 aa18.02■□□□□ 0.47
PPP1R3F-205ENST00000495799 GTSCR1Q86UQ5 136 aa18.02■□□□□ 0.47
PPP1R3F-205ENST00000495799 TPPP3Q9BW30 176 aa18.02■□□□□ 0.47
PPP1R3F-205ENST00000495799 TRAV12-3A0A0B4J271 114 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 F2Z2F3 143 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 TRGC2P03986 189 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 IGLC6P0CF74 106 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 CTRLP40313 264 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 NUTF2P61970 127 aaKnown RBP18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 KIR3DS1Q14943 382 aa18.01■□□□□ 0.47
PPP1R3F-205ENST00000495799 FAM159AQ6UWV7 190 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms