RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 F8VRH5 84 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 CNIH1O95406 144 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 IGHG3P01860 377 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 CCL17Q92583 94 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 VKORC1Q9BQB6 163 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
HDAC4-210ENST00000493582 IGHV3OR16-8A0A075B7F1 116 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 H7C1H1 209 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 PDE6HQ13956 83 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
HDAC4-210ENST00000493582 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 FABP5P3A8MUU1 101 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 LAMTOR5O43504 91 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 CD40P25942 277 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 NDUFB3O43676 98 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 UBE2D3P61077 147 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 UBE2D2P62837 147 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 HERV-K104P63124 156 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 NRACQ8N912 160 aa9.06□□□□□ -0.96
HDAC4-210ENST00000493582 LAMA5O15230 3695 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 IGHG4P01861 327 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 IGHV1-8P0DP01 117 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 UBE2D1P51668 147 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 SEM1Q6ZVN7 128 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 PRADC1Q9BSG0 188 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 PRTN3P24158 256 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 AJUBAQ96IF1 538 aa9.05□□□□□ -0.96
HDAC4-210ENST00000493582 A8MWV9 139 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 IGHV3-23P01764 117 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 SLC25A16P16260 332 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 C1orf122Q6ZSJ8 110 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 CFHR4Q92496 578 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 POLEQ07864 2286 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 IGHV1-3A0A0C4DH29 117 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 TRBV7-9A0A0J9YWB2 115 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 LINC01619G3V211 115 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 CCDC179H3BU77 68 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 LOXP28300 417 aaPredicted RBP9.04□□□□□ -0.96
HDAC4-210ENST00000493582 GFRALQ6UXV0 394 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 IGKV3D-20A0A0C4DH25 116 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 DLX6P56179 175 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 DYNAPQ8N1N2 210 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 IGFBPL1Q8WX77 278 aa9.04□□□□□ -0.96
HDAC4-210ENST00000493582 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 CD7P09564 240 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 C8orf31Q8N9H6 132 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 SCGB3A1Q96QR1 104 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 CITED1Q99966 193 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 C11orf21Q9P2W6 132 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 CRLF1O75462 422 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 Q6ZQT7 251 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 NDUFA11Q86Y39 141 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 SMAD5-AS1Q9Y6J3 95 aa9.03□□□□□ -0.96
HDAC4-210ENST00000493582 TRAV4A0A0B4J268 109 aa9.02□□□□□ -0.96
HDAC4-210ENST00000493582 C1orf210Q8IVY1 113 aa9.02□□□□□ -0.96
HDAC4-210ENST00000493582 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.96
HDAC4-210ENST00000493582 FAM27E3Q08E93 113 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 TMEM155Q4W5P6 130 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 FDCSPQ8NFU4 85 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
HDAC4-210ENST00000493582 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 SPRY2O43597 315 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 CRIP2P52943 208 aaPredicted RBP9.01□□□□□ -0.97
HDAC4-210ENST00000493582 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
HDAC4-210ENST00000493582 NEXN-AS1Q8NBZ9 246 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 OR11H6Q8NGC7 330 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 VCX2Q9H322 139 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 RHODO00212 210 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 RPL7P18124 248 aaKnown RBP9.01□□□□□ -0.97
HDAC4-210ENST00000493582 COX7A1P24310 79 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 EMP1P54849 157 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 RASL10AQ92737 203 aa9.01□□□□□ -0.97
HDAC4-210ENST00000493582 CNOT1A5YKK6 2376 aaKnown RBP9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE12JA6NER3 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 C17orf100A8MU93 164 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE7O76087 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE12FP0CL80 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE12GP0CL81 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 GAGE12IP0CL82 117 aa9□□□□□ -0.97
HDAC4-210ENST00000493582 SRD5A1P18405 259 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms