RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 LINC00477Q96M19 166 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 MS4A6AQ9H2W1 248 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 C11orf21Q9P2W6 132 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 LOC389332A0A1B0GUA5 103 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 LINC01546A6NGU7 62 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 HBDP02042 147 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 KLK15Q9H2R5 256 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 ACACBO00763 2458 aa12.91□□□□□ -0.34
FDPS-212ENST00000487002 BATFQ16520 125 aa12.9□□□□□ -0.34
FDPS-212ENST00000487002 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
FDPS-212ENST00000487002 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
FDPS-212ENST00000487002 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
FDPS-212ENST00000487002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.343e-10■■□□□ 13.4
FDPS-212ENST00000487002 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 SNAI2O43623 268 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 IGHV3-11P01762 117 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 CACNG7P62955 275 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 FAM106AQ4KMX7 169 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 SPTAN1Q13813 2472 aaKnown RBP12.89□□□□□ -0.35
FDPS-212ENST00000487002 A0A096LNT2 108 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 LOXL1Q08397 574 aaPredicted RBP12.89□□□□□ -0.35
FDPS-212ENST00000487002 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
FDPS-212ENST00000487002 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
FDPS-212ENST00000487002 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 hDV102S1A0JD36 115 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 TMEM89A2RUT3 159 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 NCR2O95944 276 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 FOXE3Q13461 319 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 Q6ZS46 218 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
FDPS-212ENST00000487002 TIMM8BQ9Y5J9 83 aaPredicted RBP12.88□□□□□ -0.35
FDPS-212ENST00000487002 K7EMT4 169 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 SAMD13Q5VXD3 122 aa12.88□□□□□ -0.35
FDPS-212ENST00000487002 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
FDPS-212ENST00000487002 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
FDPS-212ENST00000487002 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
FDPS-212ENST00000487002 DPF1Q92782 380 aa12.87□□□□□ -0.35
FDPS-212ENST00000487002 SCRT2Q9NQ03 307 aa12.87□□□□□ -0.35
FDPS-212ENST00000487002 TNFRSF6BO95407 300 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 COX6B1P14854 86 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 SLC25A34Q6PIV7 304 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 NRGNQ92686 78 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
FDPS-212ENST00000487002 H0Y8G0 127 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 PRR9Q5T870 116 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 DEFB125Q8N687 156 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 RHPN1-AS1Q9BWJ2 59 aa12.86□□□□□ -0.35
FDPS-212ENST00000487002 COL12A1Q99715 3063 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 PSMB8P28062 276 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 GAGE1Q13065 139 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
FDPS-212ENST00000487002 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
FDPS-212ENST00000487002 FLNCQ14315 2725 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 STPG4Q8N801 248 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 VPS13CQ709C8 3753 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 PRSS47A8MTI9 375 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 GOLT1BQ9Y3E0 138 aa12.84□□□□□ -0.35
FDPS-212ENST00000487002 TM4SF20Q53R12 229 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 LCNL1Q6ZST4 164 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 PMCHL2Q9BQD1 86 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 RPL11P62913 178 aaKnown RBP12.83□□□□□ -0.36
FDPS-212ENST00000487002 SPANXN1Q5VSR9 72 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 Q8N8P6 123 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 TMEM208Q9BTX3 173 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 MCRIP2Q9BUT9 160 aaKnown RBP12.83□□□□□ -0.36
FDPS-212ENST00000487002 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
FDPS-212ENST00000487002 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
FDPS-212ENST00000487002 DLEU1O43261 78 aa12.82□□□□□ -0.36
FDPS-212ENST00000487002 EVI2AP22794 236 aa12.82□□□□□ -0.36
FDPS-212ENST00000487002 FCER1GP30273 86 aa12.82□□□□□ -0.36
FDPS-212ENST00000487002 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
FDPS-212ENST00000487002 H3BVH4 76 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 FSHBP01225 129 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 G0S2P27469 103 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 OR2K2Q8NGT1 345 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 MRAP2Q96G30 205 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 SPG11Q96JI7 2443 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 COX8AP10176 69 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 ID1P41134 155 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 TMEM95Q3KNT9 176 aa12.81□□□□□ -0.36
FDPS-212ENST00000487002 IGLV2-18A0A075B6J9 118 aa12.8□□□□□ -0.36
FDPS-212ENST00000487002 TGFAP01135 160 aa12.8□□□□□ -0.36
FDPS-212ENST00000487002 ASIPP42127 132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms